TABLE 1.
General information and expression level of unique genes of “Ca. Liberibacter asiaticus” strains PGD and PYN
| Gene no. | Locus tag | TPM | Position |
Length (bp) | Region | Product | |
|---|---|---|---|---|---|---|---|
| Start | End | ||||||
| PGD unique genes | |||||||
| 1 | NKF51_00465 | 0 | 101306 | 101599 | 294 | Chromosomal | Hypothetical protein |
| 2 | NKF51_04800 | 706 | 105375 | 106523 | 1,149 | Chromosomal | Hypothetical protein |
| 3 | NKF51_04805 | 237 | 1080073 | 1080354 | 282 | Chromosomal | Hypothetical protein |
| 4 | NKF51_04810 | 409 | 1080351 | 1080677 | 327 | Chromosomal | Hypothetical protein |
| 5 | NKF51_05355 | 0 | 1195711 | 1195875 | 165 | Prophage | Coiled coil fibrinogen |
| 6 | NKF51_05360 | 672 | 1196191 | 1197135 | 945 | Prophage | Phage-related protein |
| 7 | NKF51_05365 | 0 | 1197156 | 1197632 | 477 | Prophage | Phage-related protein |
| 8 | NKF51_05380 | 495 | 1199075 | 1201507 | 2,433 | Prophage | Phage structural protein |
| 9 | NKF51_05385 | 191 | 1201504 | 1202727 | 1,224 | Prophage | Phage-related protein |
| 10 | NKF51_05390 | 650 | 1202711 | 1204972 | 2,262 | Prophage | Phage-related protein |
| 11 | NKF51_05395 | 1,436 | 1204974 | 1205462 | 489 | Prophage | Integrase |
| 12 | NKF51_05400 | 1,299 | 1205464 | 1207188 | 1,725 | Prophage | Exodeoxyribonuclease |
| 13 | NKF51_05405 | 1,245 | 1207195 | 1208967 | 1,773 | Prophage | Phage-related protein |
| 14 | NKF51_05410 | 454 | 1208960 | 1209475 | 516 | Prophage | Phage major tail subunit protein |
| 15 | NKF51_05425 | 0 | 1211271 | 1211543 | 273 | Prophage | Phage-related glutathione peroxidase |
| 16 | NKF51_05430 | 599 | 1211540 | 1213159 | 1,620 | Prophage | Phage-related head-to-tail joining protein |
| PYN unique genes | |||||||
| 1 | NLY32_02375 | 0 | 530438 | 530632 | 195 | Chromosomal | Hypothetical protein |
| 2 | NLY32_04415 | 0 | 992133 | 992318 | 186 | Chromosomal | Hypothetical protein |
| 3 | NLY32_04805 | 0 | 1079732 | 1080379 | 648 | Chromosomal | Hypothetical protein |
| 4 | NLY32_04810 | 0 | 1080352 | 1080930 | 579 | Chromosomal | Hypothetical protein |
| 5 | NLY32_05360 | 691 | 1197385 | 1199979 | 2,595 | Prophage | Phage structural protein |
| 6 | NLY32_05365 | 883 | 1199976 | 1201412 | 1,437 | Prophage | Endolysin |
| 7 | NLY32_05370 | 551 | 1201430 | 1203493 | 2,064 | Prophage | Phage-related protein |
| 8 | NLY32_05375 | 593 | 1203550 | 1204065 | 516 | Prophage | Phage-related protein |
| 9 | NLY32_05380 | 746 | 1204046 | 1208089 | 4,044 | Prophage | Cell envelope integrity protein TolA |
| 10 | NLY32_05385 | 881 | 1208114 | 1209850 | 1,737 | Prophage | Phage-related protein |
| 11 | NLY32_05390 | 1,822 | 1209843 | 1210370 | 528 | Prophage | Phage major tail subunit protein |
| 12 | NLY32_05405 | 265 | 1212074 | 1212403 | 330 | Prophage | Phage-related glutathione peroxidase |
| 13 | NLY32_05410 | 471 | 1212396 | 1214066 | 1,671 | Prophage | Phage-related head-to-tail joining protein |
| 14 | NLY32_05415 | 263 | 1214063 | 1214395 | 333 | Prophage | Holin |
| 15 | NLY32_05420 | 1,129 | 1214392 | 1214817 | 426 | Prophage | Hypothetical protein |