FIG 1.

Linear discriminant analysis for effect size (LEfSe) analysis shows enrichment of taxa that cause respective infections. LEfSe was performed on stool and oral samples for each infectious agent designated to determine differences in the microbiome by site and infectious species. Organisms with a green bar are enriched in patients with the designated infection, while organisms with a red bar are enriched in patients who do not have that designated infection. Only the graphs in which the site was enriched with the etiological agent are shown.