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. Author manuscript; available in PMC: 2024 Jun 7.
Published in final edited form as: Neuron. 2023 Apr 5;111(11):1795–1811.e7. doi: 10.1016/j.neuron.2023.03.014

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and Virus Strains
pENN.AAV1.CamKII.GCaMP6f.WPRE.SV40 Addgene Cat# 100834-AAV1; RRID: Addgene_100834
AAV1.CaMKIIa.eNpHR.3.0.EYFP Addgene Cat# 26791-AAV1; RRID: Addgene_26971
AAV1.CaMKIIa.EYFP Addgene Cat# 105622-AAV1; RRID: Addgene_105622
OTp-ChR2-mCherry Dr. Valery Grinevich N/A
OTp-VENUS Dr. Valery Grinevich N/A
OTp-hM4D(Gi)-mCherry Dr. Valery Grinevich N/A
hM4D(Gi) DREADD Addgene Cat# 50477-AAV8; RRID: Addgene_50477
CHEMICALS, PEPTIDES, AND RECOMBINANT PROTEINS
Mycobacterium tuberculosis: Complete Freund’s Adjuvant Sigma-Aldrich Cat# F5881–10ML
Oxytocin Abcam ab120186
Clozapine N-oxide Abcam ab141704
Vasotocin Trifluoroacetate Bachem 4015939.0001
EXPERIMENTAL MODELS: ORGANISMS/STRAINS
Sprague-Dawley Taconic Farms Model SD
SOFTWARE AND ALGORITHMS
MATLAB R2019a MathWorks https://www.mathworks.com/products/matlab.html
GraphPad Prism 8 GraphPad Software https://www.graphpad.com/scientific-software/prism/
Inscopix Data Acquisition Software Inscopix https://www.inscopix.com/software-analysis#software_idas
Inscopix Data Processing Software Inscopix https://www.inscopix.com/software-analysis#software_idps
Clampex 10.7 Software Molecular Devices https://support.moleculardevices.com/s/article/Axon-pCLAMP-10-Electrophysiology-Data-Acquisition-Analysis-Software-Download-Page
Constrained Nonnegative Matrix Factorization for microEndoscopic data Open source https://github.com/zhoupc/CNMF_E; https://doi.org/10.7554/eLife.28728.001
CellReg Open source https://github.com/zivlab/CellReg;
Sheintuch et al., 2017
OASIS Open source https://github.com/zhoupc/OASIS_matlab;
Friedrich et al., 2017
Gephi Open source https://gephi.org/
AnyMaze 5.0 Stoelting https://stoeltingco.com/Neuroscience/Anymaze/Any-maze-Video-Tracking/Any-maze-Software
Custom code Dr. Jing Wang’s lab https://doi.org/10.5281/ zenodo.5570672
OTHER
nVoke 2.0 Inscopix https://www.inscopix.com/nvoke
Gradient-index Lens Inscopix https://www.inscopix.com/lenses-viruses
Kwik-Sil Silicone Elastomer World Precision Instruments Code KWIK-SIL
Ceramic Ferrules Thorlabs Cat# CFLC126–10
Plantar Test Ugo Basile Cat# 37370
465 nm blue LED Plexon Cat# OPT/LED_Blue_Compact_LC_magnetic
620 nm orange LED Plexon Cat# OPT/LED_Orange_Compact_LC_magnetic
Carousel commutator Plexon https://plexon.com/products/carousel-commutator/#23rf7d84
Compact Power and Energy Meter Console, Digital “4 LCD Thorlabs Cat# PM100D
Transistor-transistor logic pulse generator Doric Lenses Code OTPG_4
Metabond Quick Adhesive Cement System C&B Cat# S380
Fluoromount Aqueous Mounting Medium Sigma-Aldrich Cat# F4680–25ML
HC-V550 Camcorder Panasonic https://www.panasonic.com/middleeast/en/support/product-archive/camcorder/hc-v550.html
Leica VT1000 S Vibrating Blade Microtome Leica Biosystems https://www.leicabiosystems.com/research/vibratomes/leica-vt1000-s/
Olympus 40x Water-Immersion Objective w/ TRITC Filter Olympus https://www.olympus-lifescience.com/en/objectives/lumplfln-w/