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. 2023 Jun 15;14:3562. doi: 10.1038/s41467-023-39214-w

Table 1.

Settings of the MD simulations of the datasets used in the work

Molecule Basis set Temp. Thermostat Coef.
Ac-Ala3-NHMe tight 500 Global Langevin 2
AT-AT tight 500 Global Langevin 2
Buckyball catcher light 400 Nosé-Hoover 1700
Lactose light 500 Nosé-Hoover 1700
Palmitic acid light 500 Nosé-Hoover 1700

Temperature is given in K. PBE stands for the Perdew-Burke-Ernzerhof functional and MBD stands for many-body dispersion74. Coefficient refers to the friction coefficient (in fs) for the global Langevin thermostat, and to the effective mass (in cm−1) for the Nosé-Hoover thermostat.