Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2023 May 25;9(5):mgen001020. doi: 10.1099/mgen.0.001020

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2023 The Authors

This is an open-access article distributed under the terms of the Creative Commons Attribution License.

PMC Copyright notice

Fig. 6. — (a) CC398 global phylogeny. Outgroup-rooted phylogenetic tree inferred from 71 097 SNP sites obtained after mapping the genomes to the complete genome of strain S0385 (ST398) and masking regions of recombination and MGEs. Branches are coloured by the host association: animal (blue), human (red). Coloured nodes represent StaphNET-SA genomes, detailing number and country of origin. AR: Argentina, BO: Bolivia, BR: Brazil, PY: Paraguay, UY: Uruguay. (b) Human-associated CC398 subtree from (a). Leaf nodes are coloured by collection: StaphNET-SA (violet), global context (grey). Coloured blocks represent the presence of an intact genetic determinant: AMR gene (red), virulence gene (violet), MGE (aqua), triclosan resistance gene (orange). Country and continent colours are described in the key. For both trees, bars represent the number of SNPs per variable site. Project is available in microreact: https://microreact.org/project/cc398-global-context.