Table 3:
CHRa | GENE | SNPsb | Minor allele | Solvent Only | 95% LLc | 95% ULd | p-value | SNPe Only | 95% LL | 95% UL | p-value | Solvent * SNP | 95% LL | 95% UL | p-value |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6 | ALDH5A1 | rs3765311 | G | 0.60 | 0.33 | 1.11 | 0.102 | 0.77 | 0.46 | 1.28 | 0.315 | 0.99 | 0.59 | 1.65 | 0.964 |
7 | CNTNAP2 | rs11771882 | T | 1.19 | 0.85 | 1.66 | 0.314 | 3.14 | 1.22 | 8.08 | 0.018 | 0.63 | 0.24 | 1.64 | 0.341 |
rs12703756 | G | 0.89 | 0.63 | 1.25 | 0.489 | 0.46 | 0.22 | 0.95 | 0.037 | 1.78 | 0.79 | 4.02 | 0.167 | ||
rs700316 | A | 0.71 | 0.48 | 1.07 | 0.099 | 0.62 | 0.39 | 1.00 | 0.048 | 1.19 | 0.73 | 1.96 | 0.484 | ||
rs75454072 | T | 1.26 | 0.89 | 1.78 | 0.197 | 2.59 | 1.31 | 5.13 | 0.006 | 0.89 | 0.47 | 1.70 | 0.726 | ||
4 | EGF | rs11569014 | A | 0.94 | 0.67 | 1.30 | 0.694 | 0.45 | 0.17 | 1.17 | 0.102 | 9.65 | 1.18 | 78.84 | 0.034 |
rs2298991 | G | 0.62 | 0.35 | 1.12 | 0.114 | 0.72 | 0.44 | 1.19 | 0.204 | 0.94 | 0.58 | 1.53 | 0.803 | ||
rs6533489 | G | 0.57 | 0.34 | 0.98 | 0.043 | 0.64 | 0.40 | 1.03 | 0.065 | 0.90 | 0.56 | 1.45 | 0.679 | ||
rs6845765 | T | 0.69 | 0.45 | 1.07 | 0.098 | 0.73 | 0.46 | 1.16 | 0.181 | 1.22 | 0.78 | 1.91 | 0.388 | ||
rs9030 | G | 0.64 | 0.39 | 1.06 | 0.081 | 0.76 | 0.48 | 1.20 | 0.233 | 1.11 | 0.70 | 1.76 | 0.667 | ||
rs9990430 | T | 0.56 | 0.33 | 0.95 | 0.030 | 0.63 | 0.39 | 1.02 | 0.058 | 0.94 | 0.59 | 1.50 | 0.785 | ||
6 | GABBR1 | rs28359976 | G | 0.83 | 0.58 | 1.19 | 0.306 | 0.48 | 0.28 | 0.84 | 0.010 | 1.20 | 0.64 | 2.23 | 0.575 |
rs29262 | G | 0.84 | 0.59 | 1.20 | 0.329 | 0.47 | 0.27 | 0.82 | 0.009 | 1.21 | 0.64 | 2.29 | 0.559 | ||
rs3025626 | A | 0.83 | 0.58 | 1.18 | 0.297 | 0.48 | 0.27 | 0.84 | 0.010 | 1.21 | 0.64 | 2.28 | 0.556 | ||
10 | GLRX3 | rs650161 | A | 0.58 | 0.34 | 0.99 | 0.047 | 0.49 | 0.30 | 0.80 | 0.005 | 0.70 | 0.43 | 1.13 | 0.142 |
rs7085125 | C | 0.66 | 0.39 | 1.09 | 0.106 | 0.67 | 0.42 | 1.09 | 0.106 | 0.96 | 0.59 | 1.55 | 0.855 | ||
rs7904125 | C | 0.62 | 0.35 | 1.10 | 0.103 | 0.94 | 0.58 | 1.54 | 0.816 | 1.24 | 0.76 | 2.02 | 0.386 | ||
6 | HCP5 | rs3094604 | G | 1.34 | 0.92 | 1.95 | 0.123 | 1.81 | 1.08 | 3.03 | 0.025 | 0.93 | 0.55 | 1.57 | 0.792 |
6 | rs2442727 | A | 1.33 | 0.92 | 1.93 | 0.132 | 1.49 | 0.88 | 2.54 | 0.137 | 0.69 | 0.40 | 1.18 | 0.177 | |
rs2524067 | G | 1.34 | 0.92 | 1.96 | 0.129 | 1.53 | 0.92 | 2.52 | 0.100 | 0.74 | 0.45 | 1.24 | 0.254 | ||
HLA-C * | rs4469339 | A | 0.60 | 0.34 | 1.03 | 0.064 | 0.66 | 0.40 | 1.07 | 0.094 | 0.90 | 0.56 | 1.45 | 0.660 | |
HLA-B | rs4992474 | T | 1.82 | 1.11 | 3.00 | 0.018 | 1.71 | 1.06 | 2.73 | 0.027 | 1.17 | 0.73 | 1.87 | 0.521 | |
rs73728881 | C | 1.72 | 1.05 | 2.82 | 0.032 | 1.58 | 0.99 | 2.53 | 0.055 | 1.13 | 0.71 | 1.81 | 0.601 | ||
6 | HLA-F | rs3116807 | A | 1.92 | 1.08 | 3.40 | 0.026 | 1.58 | 0.96 | 2.59 | 0.069 | 1.23 | 0.76 | 2.01 | 0.396 |
rs1402912 | A | 0.71 | 0.46 | 1.08 | 0.111 | 0.61 | 0.39 | 0.98 | 0.041 | 1.04 | 0.66 | 1.63 | 0.878 | ||
rs173689 | T | 0.57 | 0.30 | 1.08 | 0.084 | 0.86 | 0.50 | 1.48 | 0.594 | 1.10 | 0.64 | 1.88 | 0.728 | ||
5 | HTR1A | rs347664 | G | 0.57 | 0.31 | 1.06 | 0.077 | 0.87 | 0.50 | 1.50 | 0.615 | 1.15 | 0.66 | 2.02 | 0.614 |
rs6861297 | G | 1.28 | 0.90 | 1.84 | 0.170 | 1.89 | 1.04 | 3.44 | 0.036 | 0.76 | 0.42 | 1.35 | 0.343 | ||
rs72758792 | G | 1.45 | 0.98 | 2.15 | 0.063 | 1.64 | 0.99 | 2.69 | 0.052 | 0.83 | 0.52 | 1.33 | 0.434 | ||
rs10943542 | T | 0.77 | 0.53 | 1.12 | 0.172 | 0.54 | 0.32 | 0.89 | 0.016 | 1.28 | 0.73 | 2.24 | 0.396 | ||
rs1335430 | G | 0.70 | 0.46 | 1.09 | 0.113 | 0.42 | 0.27 | 0.68 | 0.000 | 0.71 | 0.45 | 1.13 | 0.147 | ||
rs236852 | A | 0.57 | 0.30 | 1.07 | 0.080 | 0.62 | 0.36 | 1.08 | 0.095 | 0.80 | 0.46 | 1.39 | 0.42 | ||
rs3004002 | A | 0.48 | 0.28 | 0.83 | 0.009 | 0.57 | 0.34 | 0.93 | 0.026 | 0.86 | 0.52 | 1.42 | 0.550 | ||
6 | HTR1B | rs4075570 | G | 0.63 | 0.38 | 1.05 | 0.078 | 0.83 | 0.52 | 1.34 | 0.444 | 1.18 | 0.73 | 1.90 | 0.503 |
rs4708281 | G | 0.68 | 0.42 | 1.11 | 0.122 | 0.50 | 0.31 | 0.80 | 0.004 | 0.67 | 0.41 | 1.10 | 0.112 | ||
rs58693007 | T | 0.73 | 0.49 | 1.10 | 0.131 | 0.50 | 0.31 | 0.81 | 0.005 | 0.94 | 0.58 | 1.51 | 0.788 | ||
rs62426461 | G | 0.78 | 0.54 | 1.13 | 0.183 | 0.52 | 0.31 | 0.87 | 0.013 | 1.15 | 0.66 | 1.99 | 0.631 | ||
rs62433374 | A | 0.56 | 0.33 | 0.96 | 0.034 | 0.58 | 0.36 | 0.94 | 0.028 | 0.84 | 0.52 | 1.37 | 0.485 | ||
rs75278569 | G | 0.73 | 0.50 | 1.07 | 0.102 | 0.46 | 0.28 | 0.77 | 0.003 | 1.13 | 0.68 | 1.88 | 0.642 | ||
rs7764654 | C | 0.66 | 0.40 | 1.10 | 0.114 | 0.76 | 0.47 | 1.22 | 0.248 | 1.02 | 0.63 | 1.65 | 0.932 | ||
rs7771755 | T | 0.60 | 0.32 | 1.12 | 0.11 | 0.71 | 0.41 | 1.22 | 0.213 | 0.89 | 0.52 | 1.54 | 0.687 | ||
rs77723474 | C | 0.91 | 0.65 | 1.27 | 0.583 | 0.37 | 0.14 | 0.97 | 0.043 | 2.56 | 0.89 | 7.33 | 0.080 | ||
3 | HTR1F | rs114838037 | G | 0.93 | 0.67 | 1.29 | 0.660 | 0.38 | 0.10 | 1.43 | 0.154 | 4.63 | 1.27 | 16.95 | 0.021 |
rs76107227 | C | 0.93 | 0.67 | 1.29 | 0.656 | 0.31 | 0.09 | 1.07 | 0.063 | 4.67 | 1.03 | 21.27 | 0.046 | ||
rs1172402 | C | 1.36 | 0.92 | 2.00 | 0.122 | 1.68 | 1.00 | 2.82 | 0.051 | 0.88 | 0.55 | 1.39 | 0.577 | ||
rs1928045 | C | 0.61 | 0.34 | 1.09 | 0.094 | 0.71 | 0.42 | 1.18 | 0.187 | 0.90 | 0.54 | 1.51 | 0.699 | ||
rs2149436 | C | 0.57 | 0.33 | 1.01 | 0.053 | 0.75 | 0.45 | 1.23 | 0.252 | 0.98 | 0.59 | 1.63 | 0.947 | ||
13 | HTR2A | rs4942590 | C | 0.66 | 0.41 | 1.06 | 0.086 | 0.73 | 0.46 | 1.17 | 0.189 | 1.07 | 0.68 | 1.71 | 0.762 |
rs6311 | T | 0.62 | 0.35 | 1.09 | 0.096 | 0.61 | 0.37 | 1.02 | 0.057 | 0.80 | 0.48 | 1.33 | 0.383 | ||
rs73193067 | A | 1.34 | 0.92 | 1.95 | 0.124 | 2.34 | 1.34 | 4.09 | 0.003 | 1.09 | 0.65 | 1.82 | 0.755 | ||
rs9526307 | A | 0.58 | 0.31 | 1.08 | 0.088 | 0.77 | 0.45 | 1.29 | 0.316 | 0.95 | 0.57 | 1.60 | 0.851 | ||
5 | HTR4 | rs11956922 | A | 0.62 | 0.34 | 1.14 | 0.124 | 0.78 | 0.46 | 1.32 | 0.356 | 0.98 | 0.58 | 1.67 | 0.950 |
rs6580550 | T | 0.60 | 0.32 | 1.11 | 0.103 | 0.72 | 0.42 | 1.22 | 0.222 | 0.85 | 0.50 | 1.46 | 0.564 | ||
rs1001064 | G | 0.58 | 0.35 | 0.97 | 0.039 | 0.68 | 0.42 | 1.10 | 0.121 | 1.02 | 0.64 | 1.64 | 0.93 | ||
10 | HTR7 | rs1326843 | G | 0.73 | 0.49 | 1.09 | 0.123 | 0.59 | 0.36 | 0.95 | 0.032 | 1.12 | 0.70 | 1.79 | 0.640 |
rs17092874 | C | 1.41 | 0.96 | 2.05 | 0.078 | 1.80 | 1.05 | 3.09 | 0.032 | 0.81 | 0.50 | 1.32 | 0.408 | ||
12 | IFNG | rs10784678 | C | 0.66 | 0.40 | 1.09 | 0.103 | 0.71 | 0.44 | 1.13 | 0.151 | 0.99 | 0.63 | 1.57 | 0.968 |
1 | IL10 | rs79707006 | G | 1.24 | 0.88 | 1.75 | 0.220 | 2.06 | 1.02 | 4.15 | 0.043 | 0.61 | 0.32 | 1.18 | 0.144 |
3 | IL12A | rs12491474 | G | 1.25 | 0.89 | 1.77 | 0.199 | 2.34 | 1.16 | 4.73 | 0.018 | 0.65 | 0.32 | 1.31 | 0.228 |
rs2647929 | T | 0.63 | 0.36 | 1.09 | 0.098 | 0.67 | 0.41 | 1.08 | 0.103 | 0.87 | 0.54 | 1.41 | 0.582 | ||
rs10169916 | T | 0.55 | 0.33 | 0.93 | 0.025 | 0.54 | 0.33 | 0.88 | 0.014 | 0.85 | 0.52 | 1.39 | 0.526 | ||
rs1143623 | G | 0.69 | 0.43 | 1.09 | 0.109 | 0.67 | 0.42 | 1.06 | 0.088 | 1.01 | 0.63 | 1.62 | 0.963 | ||
rs1143633 | T | 1.75 | 1.08 | 2.83 | 0.023 | 2.07 | 1.30 | 3.31 | 0.002 | 1.44 | 0.90 | 2.30 | 0.125 | ||
2 | IL1B | rs115821385 | A | 1.26 | 0.89 | 1.79 | 0.192 | 1.99 | 0.90 | 4.39 | 0.091 | 0.58 | 0.31 | 1.09 | 0.089 |
rs11690539 | A | 0.58 | 0.36 | 0.94 | 0.026 | 0.58 | 0.36 | 0.92 | 0.022 | 0.94 | 0.59 | 1.51 | 0.798 | ||
rs16944 | A | 0.54 | 0.32 | 0.92 | 0.023 | 0.55 | 0.34 | 0.90 | 0.018 | 0.83 | 0.51 | 1.36 | 0.456 | ||
rs2466446 | C | 0.53 | 0.31 | 0.89 | 0.017 | 0.54 | 0.33 | 0.88 | 0.013 | 0.80 | 0.49 | 1.32 | 0.386 | ||
rs2723152 | T | 0.64 | 0.40 | 1.02 | 0.060 | 0.59 | 0.37 | 0.95 | 0.028 | 0.94 | 0.58 | 1.50 | 0.789 | ||
2 | IL1RN | rs17669228 | T | 1.41 | 0.95 | 2.09 | 0.084 | 1.76 | 1.05 | 2.96 | 0.033 | 0.92 | 0.58 | 1.44 | 0.708 |
rs2592346 | G | 0.55 | 0.30 | 0.99 | 0.046 | 0.46 | 0.27 | 0.78 | 0.004 | 0.62 | 0.37 | 1.05 | 0.074 | ||
rs1024363 | T | 0.73 | 0.48 | 1.12 | 0.151 | 0.74 | 0.47 | 1.17 | 0.201 | 1.19 | 0.75 | 1.87 | 0.458 | ||
8 | NAT1 | rs60962775 | T | 1.26 | 0.88 | 1.80 | 0.207 | 2.24 | 1.15 | 4.34 | 0.017 | 0.91 | 0.54 | 1.55 | 0.74 |
rs6586711 | C | 0.68 | 0.43 | 1.08 | 0.100 | 0.70 | 0.44 | 1.10 | 0.122 | 1.04 | 0.66 | 1.63 | 0.871 | ||
8 | NAT2 | rs6998188 | C | 0.60 | 0.33 | 1.12 | 0.110 | 0.82 | 0.49 | 1.37 | 0.445 | 1.05 | 0.63 | 1.74 | 0.861 |
7 | PON1 | rs1157745 | T | 0.50 | 0.29 | 0.84 | 0.009 | 0.51 | 0.32 | 0.82 | 0.005 | 0.81 | 0.51 | 1.29 | 0.377 |
rs2074351 | A | 0.58 | 0.37 | 0.93 | 0.025 | 0.65 | 0.41 | 1.03 | 0.064 | 1.07 | 0.69 | 1.66 | 0.773 | ||
rs2237580 | G | 0.78 | 0.54 | 1.13 | 0.183 | 0.54 | 0.32 | 0.93 | 0.025 | 1.33 | 0.79 | 2.23 | 0.288 | ||
rs2299256 | A | 0.63 | 0.40 | 0.99 | 0.044 | 0.51 | 0.32 | 0.81 | 0.005 | 0.99 | 0.63 | 1.56 | 0.96 | ||
rs2299257 | C | 0.46 | 0.26 | 0.83 | 0.009 | 0.67 | 0.41 | 1.09 | 0.106 | 0.96 | 0.59 | 1.56 | 0.867 | ||
rs35339934 | A | 0.78 | 0.54 | 1.14 | 0.199 | 0.56 | 0.33 | 0.96 | 0.034 | 1.15 | 0.66 | 2.02 | 0.614 | ||
rs3917498 | T | 0.48 | 0.27 | 0.86 | 0.013 | 0.61 | 0.37 | 1.00 | 0.049 | 0.91 | 0.56 | 1.47 | 0.692 | ||
rs3917577 | C | 0.78 | 0.54 | 1.13 | 0.196 | 0.57 | 0.33 | 0.96 | 0.035 | 1.34 | 0.80 | 2.25 | 0.273 | ||
rs662 | C | 0.50 | 0.29 | 0.84 | 0.009 | 0.50 | 0.31 | 0.81 | 0.004 | 0.81 | 0.51 | 1.29 | 0.377 | ||
rs854555 | A | 0.61 | 0.36 | 1.04 | 0.069 | 0.59 | 0.37 | 0.96 | 0.032 | 0.81 | 0.51 | 1.29 | 0.379 | ||
rs10214759 | T | 0.93 | 0.67 | 1.30 | 0.672 | 0.25 | 0.07 | 0.83 | 0.023 | 1.95 | 0.73 | 5.16 | 0.181 | ||
6 | PSMB9 | rs17220241 | T | 0.95 | 0.68 | 1.31 | 0.736 | 0.28 | 0.08 | 0.95 | 0.041 | 2.28 | 0.80 | 6.51 | 0.124 |
rs56672687 | T | 0.94 | 0.68 | 1.31 | 0.716 | 0.28 | 0.08 | 0.95 | 0.041 | 2.18 | 0.83 | 5.75 | 0.115 | ||
rs73412927 | A | 0.94 | 0.68 | 1.31 | 0.718 | 0.28 | 0.08 | 0.95 | 0.042 | 2.10 | 0.80 | 5.54 | 0.133 | ||
rs34566446 | G | 0.62 | 0.34 | 1.13 | 0.117 | 0.58 | 0.34 | 0.98 | 0.040 | 0.74 | 0.43 | 1.24 | 0.251 | ||
7 | RELN | rs56041591 | T | 0.89 | 0.64 | 1.26 | 0.521 | 0.71 | 0.38 | 1.34 | 0.287 | 3.50 | 1.27 | 9.64 | 0.015 |
rs671372 | T | 0.54 | 0.29 | 0.99 | 0.047 | 0.44 | 0.26 | 0.75 | 0.003 | 0.59 | 0.35 | 1.00 | 0.052 | ||
rs6954835 | G | 0.54 | 0.28 | 1.05 | 0.07 | 0.51 | 0.28 | 0.92 | 0.024 | 0.61 | 0.34 | 1.10 | 0.103 | ||
rs1523526 | C | 0.60 | 0.32 | 1.12 | 0.107 | 0.51 | 0.30 | 0.89 | 0.017 | 0.64 | 0.37 | 1.11 | 0.11 | ||
rs16944364 | G | 0.84 | 0.59 | 1.19 | 0.326 | 0.43 | 0.23 | 0.82 | 0.010 | 1.45 | 0.77 | 2.73 | 0.244 | ||
15 | RORA | rs2143 | A | 2.68 | 1.39 | 5.18 | 0.003 | 1.55 | 0.94 | 2.58 | 0.089 | 1.18 | 0.72 | 1.95 | 0.51 |
rs2414708 | G | 1.59 | 1.03 | 2.45 | 0.036 | 1.82 | 1.14 | 2.92 | 0.013 | 1.17 | 0.74 | 1.84 | 0.505 | ||
rs4775287 | C | 0.68 | 0.42 | 1.11 | 0.127 | 0.73 | 0.46 | 1.16 | 0.189 | 1.02 | 0.64 | 1.61 | 0.942 | ||
rs58306294 | T | 0.74 | 0.48 | 1.14 | 0.169 | 0.75 | 0.47 | 1.18 | 0.211 | 1.18 | 0.74 | 1.86 | 0.486 | ||
rs67288758 | G | 1.23 | 0.88 | 1.72 | 0.228 | 2.35 | 0.95 | 5.82 | 0.064 | 0.42 | 0.20 | 0.87 | 0.02 | ||
rs7168305 | A | 0.84 | 0.59 | 1.19 | 0.321 | 0.34 | 0.18 | 0.66 | 0.001 | 1.21 | 0.62 | 2.35 | 0.573 | ||
rs72750685 | T | 1.18 | 0.84 | 1.65 | 0.338 | 2.50 | 1.00 | 6.29 | 0.051 | 0.63 | 0.30 | 1.29 | 0.202 | ||
rs75885569 | T | 0.92 | 0.66 | 1.28 | 0.626 | 0.31 | 0.11 | 0.88 | 0.029 | 2.35 | 0.73 | 7.56 | 0.153 | ||
rs75941956 | C | 0.91 | 0.65 | 1.27 | 0.591 | 0.40 | 0.15 | 1.03 | 0.057 | 2.77 | 0.99 | 7.74 | 0.052 | ||
6 | SOD2 | rs117664822 | A | 1.17 | 0.84 | 1.63 | 0.356 | 2.29 | 0.87 | 6.03 | 0.094 | 0.47 | 0.19 | 1.12 | 0.087 |
rs4632918 | A | 1.63 | 1.01 | 2.63 | 0.044 | 1.83 | 1.15 | 2.91 | 0.011 | 1.24 | 0.80 | 1.92 | 0.329 | ||
rs6919792 | G | 0.68 | 0.42 | 1.09 | 0.109 | 0.68 | 0.43 | 1.09 | 0.11 | 1.00 | 0.62 | 1.61 | 0.991 | ||
7 | ST7 * WNT2 |
rs38911 | A | 0.52 | 0.28 | 0.93 | 0.029 | 0.52 | 0.31 | 0.87 | 0.013 | 0.72 | 0.43 | 1.20 | 0.205 |
6 | TAP1 * PSMB9 |
rs17213826 | T | 0.93 | 0.67 | 1.30 | 0.674 | 0.32 | 0.11 | 0.90 | 0.030 | 1.76 | 0.74 | 4.20 | 0.203 |
6 | TAP2 | rs3819721 | A | 0.74 | 0.49 | 1.13 | 0.163 | 0.53 | 0.33 | 0.84 | 0.008 | 0.87 | 0.54 | 1.38 | 0.552 |
rs73410785 | C | 0.92 | 0.66 | 1.28 | 0.606 | 0.21 | 0.07 | 0.69 | 0.010 | 2.76 | 0.90 | 8.48 | 0.077 | ||
1 | TGFB2 | rs12119526 | T | 1.38 | 0.95 | 2.00 | 0.091 | 1.86 | 1.08 | 3.19 | 0.0242 \ |
0.81 | 0.49 | 1.34 | 0.416 |
rs1473527 | A | 0.67 | 0.40 | 1.11 | 0.116 | 0.67 | 0.41 | 1.07 | 0.094 | 0.91 | 0.56 | 1.47 | 0.708 | ||
rs41313742 | T | 0.86 | 0.61 | 1.21 | 0.388 | 0.67 | 0.35 | 1.28 | 0.225 | 2.33 | 1.12 | 4.84 | 0.024 | ||
rs682483 | A | 0.63 | 0.35 | 1.12 | 0.116 | 0.60 | 0.36 | 1.00 | 0.048 | 0.76 | 0.46 | 1.26 | 0.293 | ||
rs878394 | A | 0.54 | 0.29 | 1.02 | 0.056 | 0.58 | 0.33 | 1.01 | 0.055 | 0.73 | 0.42 | 1.28 | 0.275 | ||
6 | VEGFA | rs62401175 | G | 1.42 | 0.97 | 2.07 | 0.072 | 2.64 | 1.52 | 4.59 | 0.001 | 1.09 | 0.68 | 1.74 | 0.715 |
CHR-= chromosome
SNPs= single nucleotide polymorphisms
95% LL – 95% confidence interval lower limit
95% UL = 95% confidence interval upper limit