Table 1.
Basic genomic information for four common human nasal-associated Corynebacterium species.
| Corynebacter ium species | # Strain Genomes (# Nasal isolates) | Average (median) genome size (Mb) | Average (median) CDS/genome | Average (median) G+C% | Conservative Core GCs/speciesa | Pangenome GCs/speciesb |
|---|---|---|---|---|---|---|
| C. propinquum | 19 (15) | 2.51 (2.52) | 2265 (2272) | 56.47 (56.48) | 1623 | 3777 |
| C. pseudodiphthe riticum | 43 (39) | 2.33 (2.33) | 2105 (2096) | 55.29 (55.29) | 1345 | 4590c |
| C. accolens | 34 (32) | 2.50 (2.49) | 2304 (2294) | 59.46 (59.44) | 1561 | 4220d |
| C. tuberculosteari cum | 8 (6) | 2.39 (2.39) | 2250 (2253) | 59.86 (59.88) | 1788 | 3232 |
a
GET_HOMOLOGUES conservative core GCs predicted from the consensus of BDBH, OMCL, and COGS algorithms.
b
GET_HOMOLOGUES pangenome GCs predicted from the consensus of OMCL, and COGS algorithms.
c
Cps_090104 removed from dataset for this analysis due to false % core lower bound.
d
Cac_ATCC_49756 removed from dataset for this analysis due to false % core lower bound.