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. Author manuscript; available in PMC: 2024 Feb 1.
Published in final edited form as: Curr Protoc. 2023 Feb;3(2):e653. doi: 10.1002/cpz1.653

Table 1. Summary of vectors described in this work.

Plasmid name, brief description, bacterial antibiotic resistance, Addgene stock number, and bibliographic reference are indicated for all plasmids mentioned in this work. Addgene, public plasmid repository (https://www.addgene.org/)

Plasmid name Description Resistance Addgene Reference
pUPD Universal Part Domesticator plasmid: “Domestication” level plasmid to adapt parts to Goldenbraid 2.0 AmpicillinR NA (Sarrion-Perdigones et al., 2011)
pUPD2 Universal Part Domesticator plasmid 2: “Domestication” level plasmid to adapt parts to Goldenbraid 2.0 AmpicillinR 165856 (Matinyan et al., 2021b)
pUPD3 Universal Part Domesticator plasmid: 3”Domestication” level plasmid to adapt parts to Goldenbraid 2.0 ChloramphenicolR 118043 (Sarrion-Perdigones et al., 2019)
pAlpha1 Alpha level destination plasmid 1: “Alpha” level Goldenbraid 2.0 plasmid KanamycinR 118044 (Sarrion-Perdigones et al., 2019)
pAlpha2 Alpha level destination plasmid 2: “Alpha” level Goldenbraid 2.0 plasmid KanamycinR 118045 (Sarrion-Perdigones et al., 2019)
pOmega1 Omega level destination plasmid 1: “Omega” level Goldenbraid 2.0 plasmid ChloramphenicolR 118046 (Sarrion-Perdigones et al., 2019)
pOmega2 Omega level destination plasmid 2: “Omega” level Goldenbraid 2.0 plasmid ChloramphenicolR 118047 (Sarrion-Perdigones et al., 2019)
pDmHsp70B_TACT “Domesticated part” plasmid encoding the Drosophila melanogaster Hsp70 promoter AmpicillinR 165780 (Matinyan et al., 2021b)
pCP6_Dros “Domesticated part” plasmid encoding the synthetic Escherichia coli CP6 promoter containing a Drosophila melanogaster Kozak/Cavener translational initiation sequence AmpicillinR 165794 (Matinyan et al., 2021b)
pNPTII “Domesticated part” plasmid encoding a Drosophilized Neomycin phosphotransferase II of transposon Tn5 AmpicillinR 165836 (Matinyan et al., 2021b)
pHSV-TK “Domesticated part” plasmid encoding a minimal polyadenylation signal of the thymidine kinase gene from the herpes simplex virus AmpicillinR 165801 (Matinyan et al., 2021b)
pR70B04 “Domesticated part” plasmid encoding the R70B04 enhancer from Drosophila melanogaster AmpicillinR 165792 (Matinyan et al., 2021b)
pdSCP “Domesticated part” plasmid encoding the Drosophila melanogaster synthetic core promoter AmpicillinR 165776 (Matinyan et al., 2021b)
pLexA BD “Domesticated part” plasmid encoding the Drosphilized DNA binding domain of the LexA repressor from Escherichia coli AmpicillinR 165821 (Matinyan et al., 2021b)
pGGGSx4 “Domesticated part” plasmid encoding the Drosphilized peptide linker (GlyGlyGlySer)4 AmpicillinR 165807 (Matinyan et al., 2021b)
pVP16 AD “Domesticated part” plasmid encoding the Drosphilized transcription factor activation domain of VP16 from the herpes simplex virus AmpicillinR 165822 (Matinyan et al., 2021b)
pSV40L “Domesticated part” level plasmid encoding the late polyadenylation signal from simian vacuolating virus 40 AmpicillinR 165798 (Matinyan et al., 2021b)
pFC31 attB O1 “Omega” level plasmid containing the attB site from the bacteriophage phiC31 cloned in Omega level destination plasmid 1 ChloramphenicolR 165843 (Matinyan et al., 2021b)
pMiniWhiteA2 “Alpha” level plasmid encoding the dominant “eye” screening marker called “mini-white” from Drosophila melanogaster cloned in Alpha level destination plasmid 2 KanamycinR 165873 (Matinyan et al., 2021b)