TABLE 1.
Summary of genome statistics, genetic mechanisms of antibiotic resistance and biochemical identification tests
| Characteristic | Data for strain: |
|
|---|---|---|
| 2A | 2B | |
| GenBank accession no. | JAQNCX000000000 | JAQNCW000000000 |
| Genome size (bp) | 5,935,433 | 5,936,610 |
| No. of reads | 2,318,604 | 3,665,674 |
| N50 (bp) | 148,979 | 153,602 |
| GC content (%) | 52.65 | 52.65 |
| Avg coverage (×) | 110 | 180 |
| No. of contigs | 135 | 131 |
| No. of CDSa | 5,707 | 5,703 |
| Predicted antimicrobial resistance genes (ResFinder) | blaSHV-12, blaCTX-M-9, mcr-9, ant(2″)-Ia, oqxB, oqxA, aadA2, sul1, catA1, dfrA16 | blaSHV-12, blaCTX-M-9, mcr-9, ant(2″)-Ia, oqxB, oqxA, aadA2, sul1, catA1, dfrA16 |
| Predicted plasmids | IncHI2, IncHI2A, pKPC-CAV1321, Col440II, Col(pHAD28) | IncHI2, IncHI2A, pKPC-CAV1321, Col440II, Col(pHAD28) |
| Microbact result (%) | ||
| Closest match | Cronobacter sakazakii (93.57) | Cronobacter sakazakii (93.57) |
| Second closest match | Enterobacter amnigenus biogp 1 (6.06) | Enterobacter amnigenus biogp 1 (6.06) |
| MALDI-TOF result (first run [%]) | ||
| Closest match | Cronobacter sp. (1.86) | Klebsiella oxytoca (1.84) |
| Second closest match | Klebsiella oxytoca (1.82) | Salmonella sp. (1.8) |
| MALDI-TOF result (second run [%]) | ||
| Closest match | Klebsiella aerogenes (1.84) | Cronobacter sp. (1.9) |
| Second closest match | Cronobacter sp. (1.83) | Cronobacter sp. (1.89) |
a
CDS, coding DNA sequences.