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. 2023 Jun 22;16:64. doi: 10.1186/s13045-023-01466-w

Table 2.

Summary of m6A modifications to small RNAs and their cellular functions in homeostasis and human disease

Small RNA Enzyme Regulator network (↑ denotes upregulation, ↓ denotes downregulation) Cellular function Disease association Reference
miR-375 METTL14 lncRNA UCA1 ↑ → METTL14↓ → pri-miR-375↑, miR-375↓ → SOX12↑ Promotes cell proliferation and invasion but inhibits apoptosis Breast cancer [70]
miR‐181b‐3p FTO FTO ↑→ miR‐181b‐3p ↓ → ARL5B ↑ Promotes cell migration and tissue invasion Breast cancer [71]
miR-221-3p METTL3 METTL3 ↑ → m6A-modified pri-miR-221-3p ↑, miR-221-3p ↑ → HIPK2 ↓ →Che-1 ↑ Enhances drug resistance in adriamycin-resistant breast cancer cells Breast cancer [72]
miR-374c-5p Unknown Cadmium treatment → m6A-modified pri-miR-374c ↓ → pri-miR-374c ↑, miR-374c-5p ↓ → GRM3 ↑ Promotes cell proliferation and metastasis Breast cancer [73]
miR-1246 METTL3 METTL3 ↑ → m6A-modified pri-miR-1246 ↑ → pri-miR-1246 ↓, miR-1246 ↑ → SPRED2 ↓ → activates RAF/MEK/ERK pathway Promotes cancer cell metastasis Colorectal cancer [74]
Let-7b-5p METTL3 Metformin stimulation-METTL3 ↑ → pri-Let-7b ↓, pre-Let-7b↑, Let-7b-5p ↑ → suppresses Notch signaling Increases sensitivity to Osimertinib therapy in patients with cancer Lung cancer [75]
miR-143-3p METTL3 METTL3 ↑ → m6A-modified pre-miR-143-3p ↑ → pre-miR-143-3p ↓, miR-143-3p ↑ → VASH1 ↓ Triggers epithelial-mesenchymal transition (EMT) in a blood brain barrier model of ell invasion, as well as angiogenesis in the context of lung cancer Lung cancer [76]
miR-106b HNRNPA2/B1 HNRNPA2B1 ↑ → pri-miR-106b ↓, pre-miR-106b ↑, miR-106b-5p ↑ → SFRP2 ↓ → activates Wnt/β-catenin signaling Promotes cell stemness, proliferation, migration and tumor growth of lung adenocarcinoma cells Lung cancer [77]
miR-663 METTL3 METTL3 ↑ → m6A-modified pri-miR-663 ↑ → pri-miR-663 ↓, miR-663 ↑ → SOCS6 ↓ Promotes proliferation, migration and invasion of lung cancer cells Lung cancer [78]
miR-486 Unknown Propofol treatment → m6A-modified pri-miR-486 ↑ → pri-miR-486 ↓, miR-486-5p ↑ → inactivates the RAP1-NF-kappaB signaling axis Enhances cisplatin-sensitivity Lung cancer [79]
miR-576 FTO FTO ↑ → m6A -modified pri-miR-576 ↓ → pri-miR-576 ↑, miR-576 ↓ → CDK6 ↑ Promotes tumor proliferation and invasion Bladder cancer [80]
miR221/222 METTL3 METTL3 ↑ → m6A-modified pri-miR221/222 ↑ → pri-miR221/222 ↓, miR221/222 ↑ → PTEN ↓ Promotes tumor proliferation Bladder cancer [81]
miR-146 METTL3 Melittin stimulation → METTL3 ↓ → m6A-modified pri-miR-146 ↓ → pri-miR-146 ↑, miR-146a-5p ↓ → regulates NUMB/NOTCH2 pathway Induces apoptosis and inhibits tumor growth Bladder cancer [82]
miR-125b2 NSun2 PAR2 activation → m6A-modified pre-miR-125b2 in a Nsun2-dependent manner ↑ → miR-125b2 ↓ → Gab2 ↑ Promotes cancer cell migration Colorectal cancer, lung cancer [65]
miR-126 METTL14 METTL14 ↓ → m6A-modified pri-miR-126 ↓ → pri-miR-126 ↑, miR-126 ↓ Enhances cell metastasis Liver cancer [83]
miR‐589-5p METTL3 METTL3 ↑ → m6A-modified pri‐miR‐589 ↑ → pri-miR-589 ↓, miR‐589‐5p ↑ Promotes cell viability, migration and invasion Liver cancer [84]
miR-194–2 and miR-532 ALKBH5 ALKBH5 ↑ → m6A-modified pri-miR-194 ↓ → miR-194–2 ↓ → RAI1 ↑ → regulates the Hippo pathway Inhibits cell growth and motility Esophageal cancer [85]
miR-99a METTL14 METTL14 ↓ → m6A-modified pri-miR-99a ↑ → miR-99a ↑ → TRIB2 ↓ Promotes cancer stem cell persistence and radioresistance Esophageal cancer [86]
miR-92b METTL3 Deoxycholic acid treatment → METTL3 dissociation from METTL14 and WTAP complex → m6A-modified pri-miR-92b ↓ → miR-92b ↓ → PTEN ↑ → activates PI3K/AKT signaling Enhances cell proliferation Gallbladder cancer [87]
miR-19a METTL3 METTL3 ↑ → m6A-modified pri-miR-19a ↑ → miR-19a ↑ → BAMBI ↓ Facilitates nasopharyngeal carcinoma cell proliferation and invasion Nasopharyngeal carcinoma [88]
miR-126-5p METTL3 METTL3 ↑ → m6A-modified pri-miR-126-5p ↑ → miR-126-5p ↑ → PTEN ↓ activates PI3K/Akt/mTOR pathway Promotes cell proliferation, migration and invasion and inhibits apoptosis Ovarian cancer [89]
miR-1246 METTL3 METTL3 ↑ → pri-miR-1246 ↓, miR-1246 ↑ → CCNG2 ↓ Promotes the proliferation and metastasis and inhibits apoptosis Ovarian cancer [90]
miR-25-3p METTL3 Cigarette smoke stimulation → METTL3 ↑, with NKAP as a reader → m6A-modified pri-miR-25 ↑ → pri-miR-25↓, pre-miR-25 ↑, miR-25-3p ↑ Promotes pancreatic cancer cell proliferation, migration and invasion Pancreatic cancer [91]
miR-30d YTHDC1 YTHDC1 ↓ → pri-miR-30d ↑ → miR-30d ↓ → RUNX1 ↑ → SLC2A1 ↑, HK1 ↑ Promotes aerobic glycolysis to potentiate tumor proliferation, metastasis and angiogenesis Pancreatic cancer [92]
miR-222-3p METTL3 METTL3 ↑ → m6A-modified pri-miR-222-3p ↑ → miR-222-3p ↑ → STK4 ↓ Promotes tumor growth and metastasis Thyroid carcinoma [93]
miR-143-3p KIAA1429 and ALKBH5 KIAA1429 ↓, ALKBH5 ↑ → m6A-modified pri-miR-143-3p ↓ → pri-miR-143-3p ↑, miR-143-3p ↓ → DDX6 ↑ Suppresses human aortic smooth muscle cell proliferation, promotes human aortic endothelial cell apoptosis and facilitates aortic dissection progression Aortic dissection [94]
miR-19a METTL14 METTL14 ↑ → m6A-modified pri-miR-19a ↑ → miR-19a ↑ Promotes cardiovascular endothelial cell proliferation and invasion Atherosclerosis [95]
miR-25-3p METTL3 METTL3 ↓ → miR-25-3p ↓ → PTEN ↑ → phosphorylated Akt ↓ Attenuates high-glucose induced retinal pigment epithelium cell pyroptosis Diabetic retinopathy [96]
miR-93 METTL3 Cigarette smoke stimulation → METTL3 ↑→ m6A-modified pri-miR-93 ↑ → pri-miR-93 ↓, pre-miR-93 ↑, miR-93 ↑ → miR-93 endocytosed from bronchial epithelial cells into macrophages through extracellular vesicle trafficking ↑ → DUSP2 ↓ → MMP9 ↑, MMP12 ↑, activates JNK pathway Induces elastin degradation Emphysema [97]
miR-126 METTL3 METTL3 ↓ → m6A-modified pri-miR126 ↓ → pri-miR126 ↑, miR126 ↓ Facilitates the migration and invasion of human endometrial stromal cells Endometriosis [98]
miR-365-3p METTL3 METTL3 ↑ → m6A-modified pri-miR-365-3p ↑ → pri-miR-365-3p ↓, miR-365-3p ↑ Produces pain-related behaviors and neuronal sensitization in naive mice Inflammatory pain [99]
miR-34-5p METTL14 METTL14↑ → pri-miR-34 ↓, pre-miR-34 ↑, miR-34a-5p ↑ → SIRT1↓ Promotes cell cycle arrest and senescence Intervertebral disc degeneration [100]
miR-221/222 METTL3 Angiotensin II stimulation → METTL3 ↑ → m6A-modified pri-miR-221/222 ↑→ miR-221/222 ↑ → DKK2 ↓ → activates Wnt/β-catenin signaling Promotes Ang-II-induced cardiac hypertrophy Myocardial hypertrophy [101]
miR-143 METTL3 METTL3 ↓ → m6A-modified pri-miR-143 ↓ → pri-miR-143↑, pre-miR-143 ↑, miR-143 ↓ → Yap ↑, Ctnnd1 ↑ Promotes cardiomyocyte proliferation and endogenous cardiac repair after myocardial infarction Myocardial infarction [102]
miR-17-3p METTL3 METTL3 ↑ → increases binding between DGCR8 and pri-miR-17-3p → miR-17-3p ↑ Ameliorates hypoxia-induced decrease in myoproliferative capacity and increase in apoptosis Myocardial infarction [103]
miR-150 METTL3 METTL3 ↓, with YTHDF2 as a reader → m6A-modified pri-miR-150 ↓ → miR-150 ↓ → BDNF ↓ Increases the severity of neuropathic pain Neuropathic pain [104]
miR‐21 METTL3 METTL3 ↑, with HNRNPA2B1 as a reader → m6A-modified pri‐miR‐21 ↑ → miR‐21‐5p ↑ → activates the SPRY1/ERK/NF‐kB signaling pathway Promotes inflammation and the development of obstructive renal fibrosis Obstructive renal fibrosis [105]
miR-320a-3p ALKBH5 ALKBH5 ↑ → m6A-modified pri-miR-320a-3p ↓ → pri-miR-320a-3p ↑, miR-320a-3p ↓ → FOXM1↑ Promotes lung fibroblast activation and silica-induced pulmonary fibrosis Silica-induced pulmonary fibrosis [61]
miR-335 METTL3 METTL ↑ → m6A-modified pri-miR-335 ↑ → pri-miR-335 ↓, pre-miR-335 ↑, miR-335 ↑→ Erf1 ↓ Promotes stress granule formation and reduces the level of apoptosis in neurons and other cells Acute ischemic stroke [106]