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. 2023 Apr 17;3(3):128–164. doi: 10.1021/acsengineeringau.2c00053

Table 1. Comparison of Different Molecular Modeling Techniques.

molecular modeling techniques merit limitations
DFT • more accurate calculation based on the electronic state • high computational cost
  • capable of simulating: • small simulation size
  - charge polarization/transfer • incapable of calculating dynamic properties
  - bond formation/cleavage • incapable of including temperature effect (all simulations are performed at 0 K)
  - electronic-based properties, e.g., band structure, DOS, etc.  
  - chemical reactions  
  - transition state  
AIMD • includes finite temperature effect in DFT calculations • high computational cost
    • small simulation size
QM/MM • takes advantage of both DFT and MM methods • complexity in the implementation, especially at QM-MM boundary region
  • suitable for larger systems
ReaxFF • includes charge polarization to the classical force field • force field availability and transferability
  • adds bond formation/cleavage simulation into MD • shorter time- and length scales than MD
MD • includes the effect of temperature, pressure, volume, etc. in the simulations • incapable of simulating chemical reactions and bond formation/cleavage
  • larger time (up to μs) and length (up to μm) scale • lower accuracy compared to DFT calculations
  • capable of calculating: • accuracy and feasibility depend on the availability of proper force fields
  - dynamic properties, e.g. wettability, diffusion, etc.  
  - thermodynamic properties