Table 1. Genome data for Membranipora membranacea, tzMemMemb1.1.
| Project accession data | ||
|---|---|---|
| Assembly identifier | tzMemMemb1.1 | |
| Species | Membranipora membranacea | |
| Specimen | tzMemMemb1 | |
| NCBI taxonomy ID | 95170 | |
| BioProject | PRJEB45195 | |
| BioSample ID | SAMEA7536681 | |
| Isolate information | modular colony | |
| Assembly metrics * | Benchmark | |
| BUSCO ** | C:82.3%[S:79.9%,D:2.4%], F:8.3%,M:9.4%,n:954 | C ≥ 95% |
| Percentage of assembly mapped to
chromosomes |
99.95% | ≥ 95% |
| Organelles | mitochondrial genome assembled | complete single alleles |
| Raw data accessions | ||
| PacificBiosciences SEQUEL II | ERR6406215 | |
| 10X Genomics Illumina | ERR6054950–ERR6054953 | |
| Hi-C Illumina | ERR6054954 | |
| PolyA RNA-Seq Illumina | ERR6464929 | |
| Genome assembly | ||
| Assembly accession | GCA_914767715.1 | |
| Accession of alternate haplotype | GCA_914767555.1 | |
| Span (Mb) | 339.4 | |
| Number of contigs | 93 | |
| Contig N50 length (Mb) | 7.0 | |
| Number of scaffolds | 21 | |
| Scaffold N50 length (Mb) | 30.0 | |
| Longest scaffold (Mb) | 41.1 | |
* Assembly metric benchmarks are adapted from column VGP-2020 of “Table 1: Proposed standards and metrics for defining genome assembly quality” from ( Rhie et al., 2021).
** BUSCO scores based on the metazoa_odb10 BUSCO set using v5.1.2. C = complete [S = single copy, D = duplicated], F = fragmented, M = missing, n = number of orthologues in comparison. A full set of BUSCO scores is available at https://blobtoolkit.genomehubs.org/view/tzMemMemb1.1/dataset/CAJZBW01/busco.