Table 1.
MHC class | Exon | N | n. nuc | n. alleles | S | Eta | k | Pi | AA p-distance |
---|---|---|---|---|---|---|---|---|---|
MHC-I | 2 | 4 | 264 | 10 | 58 | 66 | 24.844 | 0.094 | 0.173 |
MHC-I | 3 | 113 | 262 | 91 | 58 | 67 | 15.121 | 0.058 | 0.105 |
MHC-IIA | 2 | 4 | 258 | 3 | 3 | 3 | 2.000 | 0.008 | 0.016 |
MHC-IIB | 2 | 125 | 258 | 41 | 77 | 100 | 26.574 | 0.104 | 0.178 |
N sample size, n. nuc number of nucleotides, n. alleles number of alleles, S number of polymorphic sites, Eta: total number of mutations, k: average number of nucleotide differences, Pi: nucleotide diversity, AA p-distance: number of amino acid differences per site