Table 2.
Comparison of the major genetic differences between the two lineages detected in this study and correspondence with previous nomenclatures
Clade 5 | Clade 3 | |
---|---|---|
Major lineages | none | T11, T12, T13, LAT3 |
Minor lineages | Global 3.B, Asian lineage 1, Dhaka Clade B, Dhaka B5, Dhaka B6, PSC-1 | Global 3.C, Asian lineage 2, Dhaka B1, Dhaka Clade A, PSC-2, Haitian variant |
Serotype | Predominantly Inaba | Predominantly Ogawa |
ctxB type | ctxB1 | Predominantly ctxB7a |
VSP-II type | VSP-II type 2,3,4 | VSP-II type 1/C |
ICE-SXT | SXT_ICETET/IDH_1986b and SXT_ICEGEN RND6867c | SXT_ICEGEN/RND6867 |
PLE1 | PLE1d | none |
aSubclade 3.10 carries only ctxB1 and 3.12 carries predominantly ctxB1.
bSubclades 5.18, 5.19, 5.20, 5.22.
cSubclades 5.21, 5.22.
dSubclades 5.19, 5.20, 5.23.