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. 2023 May 19;26(6):106917. doi: 10.1016/j.isci.2023.106917
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Human APJ Antibody R&D Cat# MAB8561; RRID: AB_2058383
Anti-CD31 Abcam Cat# ab32457; RRID: AB_726369
Anti-CD34 Abcam Cat# ab81289; RRID: AB_1640331
Anti-CD43 Abcam Cat# ab101533; RRID: AB_10710687
Alexa Fluor 488 Invitrogen Cat# A11034; RRID: AB_2576217
Alexa Fluor 488 Life Technologies Cat# A21202; RRID: AB_141607
Alexa Fluor 594 Life Technologies Cat# A-21207; RRID: AB_141637
Anti-SETD7 Abcam Cat# ab124708; RRID: AB_10975432
Anti-β-Catenin CST Cat# 9562s; RRID: AB_331149
Anti-GAPDH Proteintech Cat# 60004-1-1g; RRID: AB_2107436
Anti-Histone H3 (mono methyl K4) Abcam Cat# ab8895; RRID: AB_306847
Anti-POU5F1 CST Cat# 2750S; RRID: AB_823583
Anti-NANOG CST Cat# 3580S; RRID: AB_2150399
Anti-SOX2 CST Cat# 3579S; RRID: AB_2195767
Phospho-β-Catenin CST Cat# 4176T; RRID: AB_1903923
HRP-conjugated AffiniPure Goat Anti-mouse IgG Proteintech Cat# SA00001-1; RRID: AB_2722565
Anti-rabbit IgG HRP-linked Antibody CST Cat# 7074P2; RRID: AB_2099233
Lamin B1 Proteintech Cat# 66095-1; RRID: AB_11232208
Human APJ-APC-conjugated Antibody R&D Cat# FAB8561A
Anti-FLAG Sigma Cat# F1804; RRID: AB_262044
PE Mouse Anti-Human CD31 BD Biosciences Cat# 555446; RRID: AB_395839
APC Mouse Anti-Human CD34 BD Biosciences Cat# 55582; RRID: AB_2228972
Mouse IgG3 APC-conjugated Antibody R&D Cat# 1C007A
PE Mouse IgG1, κ Isotype Control BD Biosciences Cat# 559320; RRID: AB_397218
propidium iodide (PI) Solarbio Cat# C0080
DAPI Solarbio Cat# C0060
APC Mouse Anti-Human CD43 BD Biosciences Cat# 560198; RRID: AB_1645460

Deposited data

Raw and analyzed data This paper GEO: GSE228287

Critical commercial assays

EasyScript® One-Step gDNA Removal and cDNA Synthesis SuperMix transgene Cat# N10613
Hieff UNICON® Universal Blue qPCR SYBR Green Master Mix YESEN Cat# 11184ES03
Nuclear and Cytoplasmic Protein Extraction Kit Beyotime Cat# P0028
EasyScript® One-Step gDNA Removal and cDNA Synthesis SuperMix transgene Cat# N10613
apoptosis detection kit BD Biosciences Cat# 556547
protein G superparamagnetic beads Invitrogen Cat# 10003D
Lipofectamine Stem regent Invitrogen Cat# STEM00001

Experimental models: Cell lines

hESC: H1 WiCell RRID: CVCL_9771
SETD7 KO H1 This paper N/A
SETD7 KD H1 This paper N/A
SETD7 OE H1 This paper N/A
b-catenin OE H1 This paper N/A
b-catenin K180R OE H1 This paper N/A
Scramble control H1 This paper N/A
Empty Vector control H1 This paper N/A

Oligonucleotides

RT-qPCR primers This paper Table S4
SETD7 gRNA1 This paper Table S2
SETD7 gRNA2 This paper Table S2
SETD7 inducible OE primers This paper Table S1
SETD7 inducible KD primers This paper Table S3
inducible KD Scramble primers This paper Table S3
CTNNB1 inducible OE primers This paper Table S1
CTNNB1 inducible K180R primers This paper Table S1

Software and algorithms

FlowJo FlowJo https://www.flowjo.com
GSEA v4.0 Subramanian et al.71 http://software.broadinstitute.org/gsea/index.jsp
HISAT2-StringTie Pertea et al.72 http://ccb.jhu.edu/software.shtml
R v3.6 R-Project https://www.r-project.org/
GraphPad Prism GraphPad https://graphpad.com

Chemicals, peptides, and recombinant proteins

Activin A PeproTech Cat# 120-14-1000
BMP4 PeproTech Cat# 120-05ET-1000
bFGF PeproTech Cat# 100-18B-100
VEGF PeproTech Cat# 100-20-100
TPO PeproTech Cat# 30018
EPO Prospec Cat# 10064
SCF Prospec Cat# CYT-255
IL11 PeproTech Cat# 200-11
IL6 STEMCELL Technologies Cat# 78050.1
IL3 Sigma Cat# I1646
GM-CSF PeproTech Cat# HZ-1002
GCSF PeproTech Cat# HZ-1207
Flt-3L PeproTech Cat# 300-19
Y27632 Calbiochem Cat# 688000
hydrocortisone Sigma Cat# H0888
L-ascorbic acid Sigma Cat# A8960-5G
heparin Sigma Cat# H3149-500KU-9
mTeSR+supplement Stem Cell Cat# 85852
DMEM/F-12(1;1) basic Gibco Cat# C11330500BT
Fetal bovine serum Gibco Cat# 16000-044
Penicillin-Streptomycin Gibco Cat# 15140-122
Accutase Gibco Cat# AB11105-01
Costom TESR+supplement Stem Cell Cat# 05892