Table 2.

Distribution of SNPs on the B. oleracea genome.

Chr.	Chr. Length (bp)	No. genes a	Raw SNPs	Filtered SNP	Selected SNPs b
C01	43,764,888	5,401	44,427	1,940	528
C02	52,886,895	5,843	112,580	3,811	1,075
C03	64,984,695	8,490	89,494	3,618	1,040
C04	53,719,093	6,426	74,076	2,718	868
C05	46,902,585	5,851	71,841	2,931	828
C06	39,822,476	4,762	70,502	2,636	784
C07	48,366,697	5,752	94,037	3,645	1,030
C08	41,758,685	5,599	74,419	2,980	798
C09	54,679,868	6,642	76,718	3,124	989
Total	446,885,882	54,766	708,094	27,403	7,940

^aData source: EnsemblPlants (http://plants.ensembl.org/index.html).

^bWe removed F₂ plants with > 25% missing and SNPs with missing in filtered SNPs.