Table 2.
GO enrichment analysis of up-and downregulated DEGs (p-value < 0.05).
| GO function | GO ID | GO term | Upregulated DEGs | Downregulated DEGs | p-Value |
|---|---|---|---|---|---|
| Biological process | GO:0006355 | Regulation of transcription, DNA-templated | 61 | 34 | 0.00144 |
| GO:0006351 | Transcription, DNA-templated | 47 | 20 | 0.02437 | |
| GO:0055114 | Oxidation-reduction process | 42 | 19 | 0.00000 | |
| GO:0009873 | Ethylene-activated signaling pathway | 15 | 7 | 0.00001 | |
| GO:0046686 | Response to cadmium ion | 14 | 8 | 0.01605 | |
| GO:0071555 | Cell wall organization | 3 | 16 | 0.00011 | |
| GO:0006636 | Unsaturated fatty acid biosynthetic process | 16 | 0 | 0.00000 | |
| GO:0052696 | Flavonoid glucuronidation | 11 | 5 | 0.00003 | |
| GO:0009813 | Flavonoid biosynthetic process | 11 | 5 | 0.00012 | |
| GO:0006979 | Response to oxidative stress | 14 | 2 | 0.00284 | |
| GO:0009414 | Response to water deprivation | 7 | 9 | 0.01419 | |
| GO:0044550 | Secondary metabolite biosynthetic process | 9 | 6 | 0.00006 | |
| GO:0042742 | Defense response to bacterium | 10 | 5 | 0.01615 | |
| GO:0050832 | Defense response to fungus | 7 | 6 | 0.00308 | |
| GO:0009611 | Response to wounding | 5 | 8 | 0.01348 | |
| GO:0009860 | Pollen tube growth | 6 | 5 | 0.00201 | |
| GO:0009753 | Response to jasmonic acid | 7 | 3 | 0.00291 | |
| Cellular component | GO:0005576 | Extracellular region | 29 | 30 | 0.00002 |
| GO:0016020 | Membrane | 33 | 24 | 0.02183 | |
| GO:0009506 | Plasmodesma | 22 | 20 | 0.03007 | |
| GO:0005618 | Cell wall | 14 | 18 | 0.00010 | |
| GO:0005622 | Intracellular | 14 | 5 | 0.03808 | |
| GO:0048046 | Apoplast | 8 | 10 | 0.01545 | |
| GO:0043231 | Intracellular membrane-bounded organelle | 11 | 6 | 0.00505 | |
| GO:0009505 | Plant-type cell wall | 9 | 7 | 0.00300 | |
| GO:0046658 | Anchored component of plasma membrane | 5 | 6 | 0.02119 | |
| Molecular function | GO:0003677 | DNA binding | 54 | 32 | 0.00217 |
| GO:0003700 | Transcription factor activity, sequence-specific DNA binding | 52 | 32 | 0.00005 | |
| GO:0043565 | Sequence-specific DNA binding | 17 | 10 | 0.00273 | |
| GO:0016709 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 12 | 6 | 0.00000 | |
| GO:0016491 | Oxidoreductase activity | 17 | 1 | 0.00724 | |
| GO:0016717 | Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 16 | 0 | 0.00000 | |
| GO:0080043 | Quercetin 3-O-glucosyltransferase activity | 8 | 4 | 0.00076 | |
| GO:0080044 | Quercetin 7-O-glucosyltransferase activity | 8 | 4 | 0.00076 | |
| GO:0004553 | Hydrolase activity, hydrolyzing O-glycosyl compounds | 3 | 8 | 0.01282 |
GO, gene ontology; DEGs, differentially expressed genes.