Table 2.

The information of raw data filtering.

Sample	Raw Reads	Clean Reads	Error Rate	Q20	Q30	GC pct
C1	47,452,474	46,017,302	0.03	97.28	92.75	51.02
C2	50,424,042	49,060,726	0.03	97.76	93.72	52.09
C3	45,485,418	44,286,592	0.03	97.58	93.3	51.09
C4	46,667,212	45,237,462	0.03	97.83	93.94	52.97
P1	43,582,446	42,289,948	0.03	97.69	93.62	52.82
P2	46,354,432	45,081,360	0.03	97.8	93.86	52.74
P3	48,253,124	46,923,820	0.03	97.45	93.04	52.50
P4	45,705,810	44,655,822	0.03	97.64	93.4	52.45