Table 1.

Summary statistics for novel coronavirus genomes assembled in this study

Host species	Common name	Genome name	Subgenus	Length (bp)	Closest hit		BLASTn identity (%)	Prop. of query aligned (%)	CheckV completeness	Median coverage
					Accession	Name
Rhinolophus ferrumequinum	Greater horseshoe bat	RfGB01	Sarbecovirus	29,308	MW719567	RhGB01	98.1	99.7	97	689
		RfGB02	Sarbecovirus	29,375	MW719567	RhGB01	98.1	99.4	97	7178
Rhinolophus hipposideros	Lesser horseshoe bat	RhGB07	Sarbecovirus	29,224	MW719567	RhGB01	97.9	100	97	3809
		RhGB08	Sarbecovirus	29,217	MW719567	RhGB01	98	100	96	548
Plecotus auritus	Brown long-eared bat	PaGB01	Merbecovirus	30,018	MG596803	P. kuhlii MERS-related CoV	81.5	99.7	99	6237.5
Pipistrellus pipistrellus	Common pipistrelle	PpiGB01	Pedacovirus	28,247	MN535731	M. daubentonii pedacovirus	80.8	82.9	100	7438
Myotis daubentonii	Daubenton’s bat	MdGB01	Pedacovirus	28,224	MN535731	M. daubentonii pedacovirus	95.5	99.6	100	7938
		MdGB02	Pedacovirus	28,010	MN535733	M. daubentonii pedacovirus	95.4	99.8	100	7874
		MdGB03	Pedacovirus	28,227	MN535733	M. daubentonii pedacovirus	95.4	99.8	100	7958