Table 3. Root-Mean-Square Deviation of the β-Peptide Backbone from the Reference Structure.
| force field | mean RMSD (nm) | std RMSD (nm) |
|---|---|---|
| Amber | 0.093 | 0.012 |
| CHARMM | 0.108 | 0.009 |
| GROMOS 54A8 | 0.156 | 0.052 |
| GROMOS 54A7 | 0.136 | 0.012 |
| force field | mean RMSD (nm) | std RMSD (nm) |
|---|---|---|
| Amber | 0.093 | 0.012 |
| CHARMM | 0.108 | 0.009 |
| GROMOS 54A8 | 0.156 | 0.052 |
| GROMOS 54A7 | 0.136 | 0.012 |