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. 2023 Jun 7;19(12):3705–3720. doi: 10.1021/acs.jctc.3c00140

Table 2. Overview of All MD Sampling Performed on P38α.

Type of run Simulation time (ns)
Unbiased MD 500 × 4
SMD 200 × 6
1D US MEMENTO (150 + 142 + 140) × 24
1D US SMD (closing) (148 + 141) × 24
1D US SMD (opening) (147 + 130) × 24
1D US SMD (resolvation) (118 + 60) × 24
2D US MEMENTO apo (137 + 123 + 101) × 24
2D US SMD (closing) (110 + 158) × 24
2D US SMD (opening) (179 + 101) × 24
2D US MEMENTO holo (132 + 114 + 131) × 24
Total 62 μs