Table 1.
Publicly accessible databases for nephrology research.a
Name | Type of dataset available |
Link | Cohort summary |
---|---|---|---|
Chronic Renal Insufficiency Cohort (CRIC) [10] | Clinical, proteomics, transcriptomics | http://www.cristudy.org/Chronic-Kidney-Disease/Chronic-Renal-Insufficiency-Cohort-Study/ | 5499 patients with chronic kidney disease in the United States |
Cure GlomeruloNephropathies (CureGN) [11] | Clinical, imaging | https://curegn-org.webflow.io/ | 2400 adults and children with minimal change disease (MCD), focal segmental glomerulosclerosis (FSGS), membranous nephropathy (MN) or immunoglobulin A nephropathy/vasculitis (IgAN/IgAV) from 70 centres from the US, Canada, Italy and Poland |
European Rare Kidney Disease Network (ERK-Net) [12] | Clinical | https://www.erknet.org/ | >70000 patients from 72 nephrology centres in 24 European countries |
Human Heredity and Health in Africa (H3 Africa) [13] | Clinical, imaging, genomics | https://h3africa.org/index.php/h3africa-kidney-disease-research-network/ | 8000 patients with kidney disease and unaffected controls to determine whether certain genes are uniquely associated with kidney diseases in Africans |
Human Kidney and Urine Proteome Project (HKUPP) [14] | Proteomics | http://www.hkupp.org/ | International collaboration on human kidney and urine proteomics |
Japanese Chronic Kidney Disease Database (J-CKD-DB) [15] | Clinical | http://j-ckd-db.jp/ | >100000 patients from 21 university hospitals, with planned linkage to J-RBR in late 2020. |
Japan Renal Biopsy Registry (J-RBR) [16] | Clinical, imaging | https://jsn.or.jp/en/greeting/ | >40000 patients who underwent renal biopsy |
Kidney Precision Medicine Project (KPMP) [17] | Clinical, transcriptomics | https://atlas.kpmp.org/ | 2835 total samples from patients with AKI, CKD and control. |
National Registry of Rare Kidney Diseases (RaDaR) [18] | Clinical | https://ukkidney.org/audit-research/data-permissions/data/radar-database | 26913 patients from 104 sites in the UK |
Nephroseq [19] | Clinical, transcriptomics | https://www.nephroseq.org/resource/login.html | 26 datasets with 1989 samples with analytic and visualization tools available on the platform |
NEPhrotic syndrome sTUdy NEtwork (NEPTUNE) [20] | Clinical, imaging, genomics | https://www.neptune-study.org/ | 450 adults and children with minimal change disease, focal segmental glomerulosclerosis, and membranous nephropathy |
Renal Gene Expression Database [21] | Transcriptomics | http://rged.wall-eva.net/ | 5253 tissue samples and 101 cell lines from NCBI Gene Expression Omnibus |
Approvals may be necessary for access to some databases.