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. 2023 Jun 16;17(6):e0011285. doi: 10.1371/journal.pntd.0011285

Fig 3. Phylogenetic tree of the S. Typhi isolates as generated in Pathogenwatch and visualized in Microreact (https://microreact.org/project/syLwGwmBRvbSbVeq1sET2x).

Fig 3

Metadata defined in the legend indicate, from left to right (i) the type of isolate collection (recent or historical), (ii) district, (iii) genotype, (iv) AMR [multidrug resistant (MDR), decreased ciprofloxacin susceptibility (DCS), or MDR + DCS), (v) presence or absence of the IncHI1 plasmid replicon per isolate.