Table 1.
10 Most Overexpressed Genes in the RNA-seq transcriptome of chick choroids treated with 1.5 mM PAPA-NONOate
| Accession number | Ensembl ID | FPKM control (L) ± SEM | FPKM treated (R) ± SEM | Fold Change | Gene ID |
|---|---|---|---|---|---|
| XM040659395 | ENSGALG00000009446 | 0.24432 ± 0.071700814 | 5.96130 ± 1.699807346 | 24.83 | LSMEM1 |
| XM040665708 | ENSGALG00000008997 | 3.02881 ± 0.71931704 | 24.73888 ± 3.790289 | 8.17 | STEAP4 |
| XM425870 | ENSGALG00000023818 | 101.19700 ± 14.0261479 | 820.09240 ± 166.6266 | 8.1 | HSPB9 |
| XM421406 | ENSGALG00000011715 | 96.47044 ± 10.3197415 | 597.89660 ± 56.0171 | 6.2 | HSPA2 |
| XM424980 | ENSGALG00000046192 | 3.11683 ± 0.53857 | 18.0959 ± 5.35255 | 5.8 | CCL19 |
| XM419084 | ENSGALG00000013575 | 1.94991 ± 0.46951024 | 9.36739 ± 1.58115 | 4.81 | IFI6 |
| XM428357 | ENSGALG00000027707 | 1.58904 ± 0.14123103 | 7.07570 ± 0.019873 | 4.45 | ESM1 |
| XM424455 | ENSGALG00000043734 | 4.49535 ± 0.58149042 | 20.02234 ± 1.858336 | 4.45 | LIPG |
| XM003642832 | ENSGALG00000023819 | 9.27436 ± 2.72539 | 40.4566 ± 6.04158 | 4.36 | HSP30C (predicted) |
| XM421662 | ENSGALG00000045085 | 33.2954 ± 6.4383 | 143.388 ± 32.3406 | 4.31 | IFIT5 |