Table 3:

Sources for LOF data

Resource	Link
Annotations for possible LOFs	gs://gnomad-public/papers/2019-tx-annotation/pre_computed/all.possible.snvs.tx_annotated.GTEx.v7.021520.tsv
Mean methylation for CpG sites	gs://gcp-public-data--gnomad/resources/methylation
Exome sequencing coverage	gs://gcp-public-data--1gnomad/release/2.1/coverage/exomes/gnomad.exomes.coverage.summary.tsv.bgz
Variant frequencies	gs://gcp-public-data--gnomad/release/2.1.1/vcf/exomes/gnomad.exomes.r2.1.1.sites.vcf.bgz
Low mappability and segmental duplications	https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/genome-stratifications/v3.1/GRCh37/Union/GRCh37_alllowmapandsegdupregions.bed.gz