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. 2023 Jul 1;30:51. doi: 10.1186/s12929-023-00943-1

Table 3.

Prime editing enrichment strategies

Strategy Cells Target locus Selection Editing pre-enrichment Editing post-enrichment Fold increase Ref.
PEAR HEK293T FANCF FACS N.A 76% N.A [183]
PEAR K562 FANCF FACS N.A 62% N.A [183]
PEAR U2OS EMX1 FACS  ~ 15%  ~ 40% 2.67-fold [183]
PEAR HUES9 FANCF FACS 28% 7.8-fold [183]
PEAR HEK293T

HEK3/RUNX1/HEXA/

EMX1/DNMT/FANCF/

HBB/PRNP

FACS N.A Up to 84% 2.1- to 4.6-fold [183]
Marker-free co-selection K562

RNF2/RUNX1/FANCF/

EMX1

Drug selection N.A 83% N.A [184]
Marker-free co-selection HeLa

RNF2/RUNX1/FANCF/

EMX1

Drug selection  < 1% 26–59%  > 26-fold [184]
Marker-free co-selection K562 RUNX1 and FANCF Drug selection N.A 81% (RUNX1) and 64% (FANCF) N.A [184]
Marker-free co-selection K562 EMX1 and RUNX1 Drug selection N.A 63% (EMX1) and 78% (RUNX1) N.A [184]
Marker-free co-selection HeLa MTOR Drug selection 4–17% 30–78% 4- to 8-fold [184]
Marker-free co-selection U2OS MTOR Drug selection N.A 74–89% N.A [184]

N.A. not available