Table 2.
Characteristics of eROHi of the Tazy.
eROHi* | Chr | nSNP# | from | to | Size (kb) | nDog$ | Genes |
---|---|---|---|---|---|---|---|
1 | 18 | 15 | 913,868 | 1,221,882 | 308,014 | 20 | LOC111090815, LOC111090792 |
2 | 18 | 17 | 1,272,707 | 1,583,327 | 310,620 | 21 | VWC2, ZPBP, LOC119864151, SPATA48 |
3 | 18 | 57 | 3,319,077 | 4,393,071 | 1073,994 | 27 | LOC606902, LOC100687611, |
LOC119864094, | |||||||
LOC119864356, LOC111090858 | |||||||
4 | 22 | 69 | 2,029,245 | 2,904,155 | 874,910 | 20 | KPNA3, EBPL, LOC102151128, RCBTB1, SETDB2, LOC119865111, CAB39L, |
CDADC1, LOC119865167, LOC102152970, MLNR,LOC119865166,FNDC3A,LOC111091797, | |||||||
LOC119865168, LOC111091799, | |||||||
LOC102153123, LOC119865169, | |||||||
LOC119865170, CYSLTR2 | |||||||
5 | 25 | 17 | 863,981 | 1,230,408 | 366,427 | 21 | LOC102153908, LOC111092399, LOC119865890, LOC106557760, LOC119865889, LOC100683497, LOC100683578, LOC02153976 |
*Extreme Runs of Homozygosity islands.#Number of SNPs within each eROHi. $Number of individuals that occurred in each eROHi.