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. 2023 May 11;51(W1):W168–W179. doi: 10.1093/nar/gkad393

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© The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — Enriched terms for the diabetic nephropathy case study. 148 genes that are down-regulated in advanced stage DN compared with early stage were submitted to Enrichr-KG with the selected gene set libraries: KEGG pathways, WikiPathways and LINCS L1000 consensus chemical perturbations. Genes appear as green nodes, WikiPathways pathways are pink nodes, KEGG pathways are in light purple, and LINCS L1000 compounds are in turquoise and light blue. Small molecules that up regulate a gene are linked to the gene via a red link, and those that down-regulate the genes are in blue. The query can be accessed via the following URL: https://maayanlab.cloud/turl/d9e0a6f3.