Table 1.
NMR | cseed = 1 μM | cseed = 2 μM | cseed = 5 μM | cseed = 9.5 μM |
---|---|---|---|---|
y0 | 0.599 ± 0.001 | 0.250 ± 0.001 | 0.086 ± 0.001 | 0.093 ± 0.001 |
Aslow | 0.333 ± 0.001 | 0.542 ± 0.001 | 0.720 ± 0.001 | 0.32 ± 0.01 |
Afast | 0.084 ± 0.001 | 0.201 ± 0.001 | 0.223 ± 0.001 | 0.65 ± 0.01 |
kslow/h−1 | 0.031 ± 0.001 | 0.032 ± 0.001 | 0.139 ± 0.001 | 0.236 ± 0.005 |
kfast/h−1 | 0.66 ± 0.02 | 0.321 ± 0.005 | 0.739 ± 0.005 | 0.659 ± 0.008 |
tmidpoint/ha | 13 | 9.3 | 3.0 | 1.1 |
ThT | ||||
y0 | 1.019 ± 0.002 | 0.992 ± 0.001 | 0.987 ± 0.001 | 0.987 ± 0.001 |
Aslow | −1.01 ± 0.01 | −0.919 ± 0.006 | −0.367 ± 0.009 | −0.231 ± 0.003 |
Afast | n.d. | −0.085 ± 0.006 | −0.631 ± 0.008 | −0.764 ± 0.003 |
kslow/h−1 | 0.084 ± 0.001 | 0.135 ± 0.001 | 0.156 ± 0.002 | 0.141 ± 0.002 |
kfast/h−1 | n.d. | 0.76 ± 0.09 | 0.579 ± 0.008 | 1.08 ± 0.01 |
tmidpoint/h | 8.3 | 5 | 2 | 1 |
Results of fitting a double exponential function y(t) = y0 + Aslow exp(–kslowt) + Afast exp(–kfastt) to the experimental data determined by ThT fluorescence and NMR spectroscopy of samples with 100 μM aS monomers and varying concentration of preformed fibers (seeds), at T = 310 K. The midpoints, tmidoint, are plotted in Fig. S3. In Fig. 2, the amplitudes of the two phases are reported as percent of total amplitude. Amplitudes and rate constants for the fast and the low phases are plotted as a function of added seed concentration in Fig. 2. n.d.: not detected.
To determine midpoints of NMR kinetics, the time dependence of integrals obtained in 1D 1H NMR spectra (Fig. 1 B) were converted into the concentration of aS monomers. Thus, tmidpoint has been obtained at caS= 50 μM. To determine the final amount of aS monomers after seeded elongation reactions, samples were spun down, and monomers left in solution were determined by absorption spectroscopy.