Table 7. Bacterial Species Abundance in the Three Colonic Sectionsa.
| R3 | T12 | T26 | R5 | T12 | T26 |
|---|---|---|---|---|---|
| Acidaminococcus intestini | 3.58 | 5.021 | Acidaminococcus intestini | 2.48 | 2.55 |
| Bacteroides dorei | 3.45 | 4.065 | Akkermansia muciniphila | 1.10 | 2.77 |
| Bacteroides faecis | 0.00 | 4.710 | Alistipes putredinis | 7.38 | 7.59 |
| Bifidobacterium bifidum | 4.08 | 6.914 | Anaerofustis stercorihominis | 2.62 | 4.54 |
| Lactobacillus paracasei | 3.16 | 6.068 | Anaerotruncus colihominis | 3.17 | 4.48 |
| OTU1217|Roseburia inulinivorans|D = 96.6 | 0.00 | 3.764 | Bacteroides clarus | 2.75 | 3.13 |
| OTU20|Bacteroides xylanisolvens|D = 96.4 | 2.58 | 5.154 | Bacteroides uniformis | 0.00 | 0.98 |
| OTU815|Pseudomonas monteilii|D = 96.2 | 7.45 | 9.218 | Bifidobacterium adolescentis | 0.00 | 1.56 |
| Propionibacterium acnes | 0.99 | 2.052 | Christensenella minuta | 5.32 | 5.45 |
| Ralstonia mannitolilytica | 2.31 | 4.525 | Desulfovibrio piger | 0.00 | 1.97 |
| R4 | T12 | T26 | Dorea longicatena | 7.40 | 7.76 |
| Alistipes indistinctus | 5.68 | 5.99 | Eubacterium eligens | 3.99 | 5.24 |
| Bacteroides dorei | 3.42 | 5.04 | Holdemania filiformis | 7.68 | 8.09 |
| Bilophila wadsworthia | 1.46 | 1.99 | Odoribacter splanchnicus | 4.71 | 5.28 |
| Christensenella minuta | 4.22 | 5.11 | Oscillibacter valericigenes | 1.95 | 2.29 |
| Dorea longicatena | 7.39 | 7.75 | Oscillospira plautii | 2.62 | 2.96 |
| Enterobacter cancerogenus | 0.00 | 0.80 | OTU1096|Alistipes indistinctus|D = 96 | 4.04 | 4.77 |
| Eubacterium eligens | 3.83 | 6.28 | OTU1103|Oscillospira[Pseudoflavonifractor]capillosus|D = 92.3 | 1.95 | 2.29 |
| Oscillibacter valericigenes | 1.86 | 1.99 | OTU1151|Ruminococcus bromii|D = 89.6 | 0.00 | 1.97 |
| Oscillospira plautii | 0.91 | 2.45 | OTU1209|Roseburia intestinalis|D = 93.1 | 6.12 | 6.99 |
| OTU1096|Alistipes indistinctus|D = 96 | 3.29 | 3.69 | OTU1217|Roseburia inulinivorans|D = 96.6 | 5.05 | 5.98 |
| OTU1209|Roseburia intestinalis|D = 93.1 | 5.49 | 7.84 | OTU1235|Parabacteroides distasonis|D = 96.7 | 4.86 | 5.45 |
| OTU1251|Gemmiger formicilis|D = 94.7 | 2.84 | 6.02 | OTU1251|Gemmiger formicilis|D = 94.7 | 4.68 | 5.63 |
| OTU1262|Catabacter hongkongensis|D = 84.1 | 0.00 | 6.71 | OTU1262|Catabacter hongkongensis|D = 84.1 | 2.32 | 6.30 |
| OTU1572|Parabacteroides distasonis|D = 95.3 | 4.00 | 4.45 | OTU132|Bacteroides vulgatus|D = 97 | 1.95 | 4.54 |
| OTU719|Victivallis vadensis|D = 94.5 | 3.53 | 6.52 | OTU1461|Desulfitobacterium frappieri|D = 84.5 | 3.76 | 3.87 |
| Parabacteroides merdae | 0.91 | 1.32 | OTU1524|Anaerofilum pentosovorans|D = 90.6 | 0.00 | 1.97 |
| Ralstonia mannitolilytica | 1.46 | 1.69 | OTU616|Turicibacter sanguinis|D = 87.1 | 0.00 | 7.02 |
| Ruminococcus callidus | 0.00 | 7.75 | OTU719|Victivallis vadensis|D = 94.5 | 5.25 | 8.56 |
| OTU80|Eubacterium desmolans|D = 94.1 | 5.02 | 5.05 | |||
| OTU914|Ruminococcus bromii|D = 87.6 | 3.82 | 4.21 | |||
| OTU955|Barnesiella intestinihominis|D = 87 | 5.42 | 5.84 | |||
| Propionibacterium acnes | 1.95 | 1.97 | |||
| Ruminococcus callidus | 0.00 | 7.91 |
a
T12 represents the end of the stabilization period, and T26 is the end of the treatment period. Values represent the relative abundance %.