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[Preprint]. 2023 Jul 2:2023.07.01.546933. [Version 1] doi: 10.1101/2023.07.01.546933

Figure 5: Engineering the structural ensemble by programming the mechanical potential and activity.

Figure 5:

A. Experimental workflow: The MEP-ECM or MEP-MEP interfacial tensions were perturbed using shRNA against TLN1 (green) and CTNND1 (red). A non-targeting shRNA was used as control (blue). Equal proportion of mCh+ normal and GFP+ shRNA-transduced MEP were aggregated into spheroids (KD-MEP spheroids) and cultured either in Matrigel or agarose.

B. The macrostate energy calculations for KD-MEP spheroids in Matrigel (top) and agarose (bottom) using the BCC lattice model.

C. The predicted ensemble distributions for KD-MEP spheroids cultured in Matrigel (top) and agarose (bottom).

D. The measured probability densities for KD-MEP spheroids cultured in Matrigel (top) and agarose (bottom). Histograms show the distribution of experimental data, dashed vertical lines are the average ϕb, and the solid curves are the theoretical predictions for each condition. The number of observations is noted at the top of the graphs.