Key resources table
REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Bacterial and virus strains | ||
scAAV9-CBh-GFP | UNC Vector Core | N/A |
AAV9-pAAV.CAG.GCaMP6f.WPRE.SV40 | Chen et al.104 | Addgene plasmid # 100836 |
Chemicals, peptides, and recombinant proteins | ||
Cholera Toxin Subunit B, Alexa Fluor 488 conjugate | Fisher Scientific | C34775 |
Cholera Toxin Subunit B, Alexa Fluor 555 conjugate | Fisher Scientific | C34776 |
Cholera Toxin Subunit B, Alexa Fluor 647 conjugate | Fisher Scientific | C34778 |
4',6-diamidino-2-phenylindole, dihydrochloride (DAPI) | Fischer Scientific | PI62247 |
Paraformaldehyde | Electron Microscopy Sciences | 15710 |
Critical commercial assays | ||
nVista System | Inscopix | N/A |
Miqus motion capture cameras | Qualysis | N/A |
Deposited data | ||
Retrograde tracing | This paper | DOI upon publication |
Calcium imaging | This paper | DOI upon publication |
Experimental models: Organisms/strains | ||
Poecile atricapillus (Black-capped chickadee) | Wild caught (NY state) | N/A |
Baeolophus bicolor (Tufted titmouse) | Wild caught (NY state) | N/A |
Software and algorithms | ||
ImageJ | NIH, open source | N/A |
MATLAB 2020a | Mathworks | https://www.mathworks.com |
BONSAI | Lopes et al., 2015105 | https://bonsai-rx.org |
Arduino | Open-source | https://www.arduino.cc/en/software |
Illustrator CC 2021 | Adobe | https://www.adobe.com/products/illustrator.html |