Table 7.

Gene annotation of C. spinosus genome via three methods.

Method	Gene set	Species	Number
Ab initio	Augustus	—	26,453
	SNAP	—	57,975
Homology-based	GeMoMa	C. lumpus	18,793
		D. rerio	9,703
		L. tanakae	25,565
		S. umbrosus	18,796
RNA-seq	GeneMarkS-T	—	20,356
	PASA	—	19,983
Integration	EVM	—	25,358