Table 3.
Statistics for Previously Published Plant PGs
| Organism | Citation | Number of Accessions | Construction Approach | Total Pan-genes | Nonreference Pan-genes (%) | Overall Occupancy (%) | Core Pan-genes (%) |
|---|---|---|---|---|---|---|---|
| B. napus | Song et al. (2020) | 9 | DN | 105,672 | 28.74 | 68.94 | 31.5 |
| Hurgobin et al. (2018) | 53 | IA | 94,013 | 12.34 | 89.47 | 77.11 | |
| Rice | Zhao et al. (2018) | 69 | DN | 42,580 | 23.71 | 72.82 | 57.84 |
| Wang et al. (2018) | 453 | MTP | 48,099 | 25.92 | 81.92 | 64.56 | |
| Brachypodium distachyon | Gordon et al. (2017) | 56 | DN | 61,158 | 52.93 | 45.7 | 28.12 |
| Cucumber | Li et al. (2022) | 12 | DN | 26,822 | 14.66 | 85.34 | 69.43 |
| Medicago truncatula | Zhou et al. (2017) | 16 | DN | 129,650 | 48.24 | 88.08 | 67.17 |
| Maize | Hufford et al. (2021) | 26 | DN | 103,032 | 53.65 | 48.44 | 29.9 |
| Apple | Sun et al. (2020) | 83 | MTP | 69,411 | 10.49 | 89.77 | 78.96 |
| Brassica oleracea | Golicz et al. (2016a, 2016b) | 10 | IA | 61,379 | 11.08 | 91.66 | 81.29 |
| Eggplant | Barchi et al. (2021) | 26 | MTP | 35,148 | 2.32 | 94.47 | 92.03 |
| Pigeon pea | Zhao et al. (2020) | 89 | IA | 55,512 | 3.42 | 76.39 | 55.38 |
| Soybean | Torkamaneh et al. (2021) | 205 | MTP | 54,533 | 3.04 | 97.23 | 93.22 |
| Sunflower | Hübner et al. (2019) | 287 | IA | 45,302 | 37.66 | 83.06 | 73.02 |
| Tomato | Gao et al. (2019) | 586 | MTP | 40,369 | 25.84 | 88.95 | 86.33 |