Table 4.
Lineage | Mobility | Stringency index | Vaccinated | Mask use | Cases |
---|---|---|---|---|---|
B.1.1 | 0.06 (0.009)* | 0.35 (6.64e−11)* | NA | 0.82 (<2.2e−16)* | 0.21 (1.07e−06)* |
B.1.111 | 0.75 (<2.2e−16)* | 0.17 (1.02e−05)* | NA | 0.21 (9.996e−07)* | 0.61 (<2.2e−16)* |
B.1.1.348 | 0.37 (9.93e−12)* | 0.20 (1.96e−06)* | NA | 0.02 (0.08) | 0.11(0.0003)* |
B.1.420 | 0.72 (<2.2e−16)* | 0.33 (1.65e−10)* | NA | 0.27 (1.006e−08)* | 0.75 (<2.2e–16)* |
B.1.617+AY (Delta) | 0.81 (<2.2e−16)* | 0.60 (<2.2e−16)* | 0.67 (<2.2e–16)* | 0.76 (<2.2e−16)* | 0.10 (0.0004)* |
P.1 (Gamma) | 0.51 (<2.2e−16)* | 0.54 (<2.2e−16)* | 0.60 (<2.2e–16)* | 0.49 (<2.2e−16)* | 0.03 (0.03)* |
B.1.621 (Mu) | −0.0006 (0.33) | 0.01 (0.15) | −0.009 (0.84) | −0.008 (0.65) | 0.28 (7.907e–09)* |
B.1.1.7 (Alpha) | 0.10 (0.0007)* | 0.09 (0.001)* | 0.08 (0.007)* | −0.01 (0.92) | 0.002 (0.25) |
C.37 (Lambda) | −0.007 (0.60) | 0.21 (6.51e−07)* | 0.48 (1.58e−13)* | 0.41 (2.26e−13)* | 0.05 (0.01)* |
Omicron | 0.11 (0.0004)* | 0.14 (4.39e−05)* | 0.87 (<2.2e−16)* | 0.61 (<2.2e–16)* | 0.11 (0.0004)* |
We tested five predictors using a linear regression between a response variable (Ne of each variant) and one variable or predictor (explanatory variables). The values in the table show the adjusted R-squared and (p-value). *: statistically significant. NA means that the variable was not recorded for all period of time that a particular variant circulated.