Skip to main content
. 2023 Jun 30;14:1082862. doi: 10.3389/fimmu.2023.1082862

Table 1.

Summary of the potential causal associations between GM and HR HLA CeD.

GM to HR-HLA CeD
TAXONOMIC LEVEL 2SMR RESULTS
Phylum Class Order Family Genus IVs Beta SE p-value
Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcaceae UCG010 3 1,690 0,828 0,041
Firmicutes Clostridia Clostridiales Ruminococcaceae Ruminococcaceae UCG011 2 -1,190 0,509 0,019
Firmicutes Clostridia Clostridiales Lachnospiraceae Lachnospiraceae UCG008 3 1,462 0,586 0,012
Firmicutes Negativicutes Veillonellales Veillonellaceae - 7 1,112 0,454 0,014
FamilyXIII UCG001 4 1,216 0,580 0,036
HR-HLA CeD to GM
TAXONOMIC LEVEL 2SMR RESULTS
Phylum Class Order Family Genus IVs Beta SE p-value
Firmicutes Clostridia Clostridiales Ruminococcaceae Anaerotruncus 3 -0,053 0,018 0,003
Firmicutes Clostridia Clostridiales Lachnospiraceae Tyzzerella3 3 -0,084 0,032 0,008
Bacteroidetes Bacteroidia Bacteroidales Rikenellaceae RikenellaceaeRC9 gutgroup 3 0,085 0,040 0,036
Proteobacteria Gammaproteobacteria - 3 0,047 0,018 0,011
Proteobacteria Gammaproteobacteria Pasteurellales - 3 0,049 0,024 0,041
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae - 3 0,049 0,024 0,041
Unknowngenus 3 -0,057 0,023 0,014

Significant threshold was set at p-value <0.05 for the Inverse Variance Weighted method (IVW). IVs, Instrumental Variables; SE, standard error.

In black are depicted the direct results from our bidirectional 2SMR analysis, while in grey are indicated the upper taxonomic level of each hit.