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. Author manuscript; available in PMC: 2023 Jul 14.
Published in final edited form as: Proc Mach Learn Res. 2022 Dec;189:265–279.

Table 12:

Gaussian and binary data with n = 200 and p = 1002 under MNAR. Approximately 40% features and 88% cases contain missing values. Here Linear RR and MICE are not included due to running out of RAM.

Models Style Time(s) Imp MSE Imp accu Bias(β^1) CR(β^1) SE(β^1) SD(β^1)
SoftImpute SI 24.7 0.0432 0.3328 −0.2771 0.64 0.2154 0.2263
GAIN SI 95.3 0.8517 0.3328 0.9779 0.12 0.1605 0.7701
MIWAE SI 57.7 0.1258 0.6706 0.6665 0.15 0.1604 0.2274
not-MIWAE SI 42.7 1.9305 0.3317 0.6158 0.06 0.0851 0.1876
Sinkhorn MI 43.6 0.1080 0.3273 0.4175 0.72 0.3033 0.2882
MI-NNGP1 MI 3.6 0.0117 0.6477 0.0137 0.94 0.1492 0.1514
MI-NNGP1-BS MI 3.7 0.0146 0.6201 0.0154 0.98 0.1785 0.1423
MI-NNGP2 MI 4.2 0.0089 0.7277 0.0125 0.99 0.1469 0.1238
MI-NNGP2-BS MI 10.0 0.0093 0.6971 0.0044 0.98 0.1558 0.1243
Complete data - - - - 0.0156 0.96 0.1119 0.1041
Complete case - - - 0.3909 0.70 - 0.2854 0.3001
ColMean Imp SI - 0.1259 0.3273 0.4620 0.71 0.2996 0.2367