Table 5. Statistical analysis of the mutations for different resistance categories.
WT = wild type, MUT = mutations, FQ = fluoroquinolones, SLID = second-line injectable drugs, A = absent, P = present
| Contingency tables | ||||||
| gyrA_WT1 | FQ | FQ+SLID | S | SLID | Total | P |
| A | 1 | 0 | 0 | 0 | 1 | 0.294 |
| P | 31 | 8 | 104 | 6 | 149 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_WT2 | FQ | FQ+SLID | S | SLID | Total | |
| A | 14 | 1 | 0 | 0 | 15 | |
| P | 18 | 7 | 104 | 6 | 135 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_WT3 | FQ | FQ+SLID | S | SLID | Total | |
| A | 18 | 7 | 0 | 0 | 25 | |
| P | 14 | 1 | 104 | 6 | 125 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_MUT1 | FQ | FQ+SLID | S | SLID | Total | |
| A | 18 | 7 | 104 | 6 | 135 | |
| P | 14 | 1 | 0 | 0 | 15 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_MUT2 | FQ | FQ+SLID | S | SLID | Total | |
| A | 31 | 8 | 104 | 6 | 149 | 0.294 |
| P | 1 | 0 | 0 | 0 | 1 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_MUT3A | FQ | FQ+SLID | S | SLID | Total | |
| A | 29 | 6 | 104 | 6 | 145 | |
| P | 3 | 2 | 0 | 0 | 5 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_MUT3B | FQ | FQ+SLID | S | SLID | Total | |
| A | 32 | 5 | 104 | 6 | 147 | |
| P | 0 | 3 | 0 | 0 | 3 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_MUT3C | FQ | FQ+SLID | S | SLID | Total | |
| A | 18 | 6 | 104 | 6 | 134 | |
| P | 14 | 2 | 0 | 0 | 16 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrA_MUT3D | FQ | FQ+SLID | S | SLID | Total | |
| A | 31 | 8 | 104 | 6 | 149 | 0.294 |
| P | 1 | 0 | 0 | 0 | 1 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrB_WT1 | FQ | FQ+SLID | S | SLID | Total | |
| A | 2 | 0 | 0 | 0 | 2 | 0.058 |
| P | 30 | 8 | 104 | 6 | 148 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrB_MUT1 | FQ | FQ+SLID | S | SLID | Total | |
| A | 32 | 8 | 104 | 6 | 150 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrB_MUT2 | FQ | FQ+SLID | S | SLID | Total | |
| A | 32 | 8 | 104 | 6 | 150 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrB_WT1_18 | FQ | FQ+SLID | S | SLID | Total | |
| A | 0 | 6 | 0 | 5 | 11 | |
| P | 32 | 2 | 104 | 1 | 139 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrB_WT2 | FQ | FQ+SLID | S | SLID | Total | |
| P | 32 | 8 | 104 | 6 | 150 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrB_MUT1_20 | FQ | FQ+SLID | S | SLID | Total | |
| A | 32 | 0 | 104 | 1 | 137 | |
| P | 0 | 8 | 0 | 5 | 13 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| gyrB_MUT2_21 | FQ | FQ+SLID | S | SLID | Total | |
| A | 32 | 8 | 104 | 6 | 150 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| eis_WT1 | FQ | FQ+SLID | S | SLID | Total | |
| P | 32 | 8 | 104 | 6 | 150 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| eis_WT2 | FQ | FQ+SLID | S | SLID | Total | |
| A | 0 | 0 | 0 | 1 | 1 | |
| P | 32 | 8 | 104 | 5 | 149 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| eis_WT3 | FQ | FQ+SLID | S | SLID | Total | |
| P | 32 | 8 | 104 | 6 | 150 | |
| Total | 32 | 8 | 104 | 6 | 150 | |
| eis_MUT1 | FQ | FQ+SLID | S | SLID | Total | |
| A | 32 | 8 | 104 | 3 | 147 | |
| P | 0 | 0 | 0 | 3 | 3 | |
| Total | 32 | 8 | 104 | 6 | 150 | |