Table 1. Alternative exon use (DexSeq) in Nab2ex3 head transcriptomes.
Table 1—source data 1. Files (.bed format, openable as .excel tables) of splicing defects detected by lower threshold analysis than in Table 1.
Abbreviations: A3’SS, alternative 3′ splice site; A5’SS, alternative 5′ splice site; MEE, mutually exclusive exon; RI, retained intron; SE, skipped exon.
elife-64904-table1-data1.zip (71KB, zip)
| Females | Males | |
|---|---|---|
| No. of alternatively used exons * | 151 | 114 |
| * |(exon usage fold change)| >~1.75 BH Adj. p<0.05 | ||
| Top mis-spliced transcripts | ||
| Females | foldΔ exon usage | BH adj. p-value |
| Sex lethal (Sxl) | 2.86 | 3.08 × 10–235 |
| CG13124 | 2.45 | 1.09 × 10–81 |
| Ih channel | 2.29 | 3.28 × 1063 |
| Ace | 1.81 | 1.02 × 10–59 |
| Males | foldΔ exon usage | BH adj. p-value |
| Ace | 2.02 | 1.88 × 10–169 |
| Pkc53E | 1.74 | 6.12 × 10–102 |
| plx | 2.12 | 9.03 × 10–67 |
| Pkn | 1.84 | 9.04 × 10–67 |
| Bacc | 2.31 | 1.11 × 10–64 |