Table 3.
Transcripts expression profile.
Category | Genes | P value | Fold change (FC) | Log2FC | Category | Genes | P value | Fold change (FC) | Log2FC |
---|---|---|---|---|---|---|---|---|---|
Chemokine and their receptors | CCL11 | 0.2950 | 0.63 | − 0.67 | Cell surface markers | CD27 | 0.3831 | 0.64 | − 0.64 |
CCL5 | 0.0550 | 0.62 | − 0.69 | CD28* | 0.0101 | 0.4 | − 1.32 | ||
CCL7 | 0.3096 | 2.26 | 1.18 | CD4 | 0.6380 | 0.74 | − 0.43 | ||
CCR2 | 0.0757 | 1.49 | 0.58 | CD40LG | 0.1840 | 0.53 | − 0.92 | ||
CCR3 | 0.2707 | 0.35 | − 1.51 | CD80* | 0.0100 | 0.53 | − 0.92 | ||
CCR4 | 0.9901 | 0.84 | − 0.25 | CD86 | 0.0700 | 1.58 | 0.66 | ||
CCR5 | 0.0858 | 1.52 | 0.60 | Transcription factors | NFATC1* | 0.0168 | 0.7 | − 0.51 | |
CXCR3 | 0.0713 | 0.13 | − 2.94 | NFATC2 | 0.2058 | 0.41 | − 1.29 | ||
Cytokine and their receptors | IFNγ | 0.1315 | 0.53 | − 0.92 | STAT1* | 0.0039 | 2.08 | 1.06 | |
IL12B | 0.1383 | 0.44 | − 1.18 | STAT4 | 0.0893 | 0.59 | − 0.76 | ||
IL12RB2 | 0.2324 | 0.64 | − 0.64 | STAT6 | 0.8219 | 0.92 | − 0.12 | ||
IL18 | 0.3630 | 0.83 | − 0.27 | TBX21 | 0.0861 | 0.58 | − 0.79 | ||
IL18R1 | 0.3914 | 0.63 | − 0.67 | GATA3 | 0.0767 | 0.43 | − 1.22 | ||
IL1R1 | 0.6926 | 0.74 | − 0.43 | CEBPB | 0.1852 | 1.32 | 0.40 | ||
IL1RL1 | 0.4791 | 0.56 | − 0.84 | CREBBP | 0.0763 | 0.64 | − 0.64 | ||
IL2 | 0.1143 | 0.56 | − 0.84 | Signaling pathways | IRF1* | 0.0470 | 1.42 | 0.51 | |
IL2RA* | 0.0170 | 0.56 | − 0.84 | IRF4 | 0.4074 | 0.87 | − 0.20 | ||
IL10 | 0.2168 | 1.95 | 0.96 | JAK1 | 0.3348 | 0.77 | − 0.38 | ||
IL13 | 0.8121 | 0.99 | − 0.01 | JAK2 | 0.2628 | 1.21 | 0.28 | ||
IL13RA1 | 0.8094 | 1.02 | 0.03 | TLR4* | 0.0081 | 1.67 | 0.74 | ||
IL24* | 0.0007 | 0.35 | − 1.51 | TLR6 | 0.3490 | 0.79 | − 0.34 | ||
IL25 | 0.3638 | 0.85 | − 0.23 | SPP1 | 0.8211 | 2.5 | 1.32 | ||
IL27RA | 0.3498 | 0.72 | − 0.47 | LAT | 0.5322 | 0.74 | − 0.43 | ||
IL27* | 0.0010 | 3.56 | 1.83 | MAPK8 | 0.1079 | 0.75 | − 0.42 | ||
IL15* | 0.0365 | 1.62 | 0.70 | TYK2 | 0.0758 | 0.6 | − 0.74 | ||
IL3 | 0.7800 | 1.1 | 0.14 | Immune check point markers | ICOS | 0.5192 | 0.89 | − 0.17 | |
IL4 | 0.3026 | 0.57 | − 0.81 | CTLA4 | 0.0926 | 0.56 | − 0.84 | ||
IL4R | 0.7837 | 1.01 | 0.01 | LAG3 | 0.1704 | 0.49 | − 1.03 | ||
IL5 | 0.9549 | 0.78 | − 0.36 | Growth factors | CSF2 | 0.6319 | 0.39 | − 1.36 | |
IL6 | 0.2967 | 1.39 | 0.48 | VEGFA | 0.6129 | 1.08 | 0.11 | ||
IL6R | 0.1882 | 0.74 | − 0.43 | Apoptotic markers | MAF | 0.3114 | 0.71 | − 0.49 | |
IL7 | 0.0646 | 0.64 | − 0.64 | BCL6 | 0.2864 | 1.35 | 0.43 | ||
IL7R | 0.9979 | 0.78 | − 0.36 | PCGF2 | 0.8918 | 0.64 | − 0.64 | ||
IL9 | 0.3435 | 1.41 | 0.50 | FASLG | 0.1115 | 0.44 | − 1.18 | ||
Immune suppressive markers | GFI1 | 0.2735 | 0.5 | − 1.00 | LTA | 0.4669 | 0.32 | − 1.64 | |
TGFβ* | 0.0096 | 0.55 | − 0.86 | Other Immune transcripts and receptors | SFTPD | 0.3554 | 0.54 | − 0.89 | |
SOCS1 | 0.1438 | 1.38 | 0.46 | SLC11A1 | 0.0712 | 1.38 | 0.46 | ||
SOCS5 | 0.6005 | 1.08 | 0.11 | HAVCR2 | 0.3594 | 1.22 | 0.29 | ||
PTPRC | 0.1737 | 0.8 | − 0.32 | ||||||
TNF family | TNF | 0.6553 | 1.15 | 0.20 | YY1 | 0.3412 | 0.83 | − 0.27 | |
TNFRSF8 | 0.4387 | 0.83 | − 0.27 | EBI3 | 0.5254 | 0.46 | − 1.12 | ||
TNFRSF9 | 0.1410 | 0.7 | − 0.51 | PTGDR2* | 0.0349 | 0.45 | − 1.15 | ||
TNFSF4 | 0.1397 | 0.71 | − 0.49 |
Significant values are indicated in bold.