TABLE 4.
Comparison of microsatellite genotyping data and pvcrt-o MS334 and In9pvcrt markers results in paired Malaysian isolatesa
Pair | Sample | MS12 | pv3.27 | msp1f3 | MS10 | MS5 | MS1 | MS8 | MS16 | MS20 | MLGb | Indel mutation similarities |
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MS334 | In9pvcrt | ||||||||||||
1 | MK079 | 209 | 280 | 258 | 195 | 194 | 237 | 281 | 385 | 201 | 1 | - | - |
1 | MK2079 | 209 | 280 | 258 | 195 | 194 | 237 | 281 | 385 | 201 | 1 | ||
2 | MV010 | 206 | 280 | 261 | 180 | 182 | 237 | 263 | 352 | 201 | 2 | - | - |
2 | MV1010 | 206 | 280 | 261 | 180 | 182 | 237 | 263 | 352 | 201 | 2 | ||
3 | MV019 | 209 | 280 | 258 | 195 | 182 | 237 | 281 | 385 | 219 | 3 | ✗ | - |
3 | MV1019 | 209 | 280 | 258 | 195/153 | 182 | 237 | 281 | 385 | 219 | 3/4 | ||
4 | MV021 | 209 | 280 | 348 | 195 | 164 | 228 | 281 | 463 | 201 | 5 | ✓ | ✓ |
4 | MV1021 | 209 | 280 | 348 | 195 | 164 | 228 | 281 | 463 | 201 | 5 | ||
5 | MV033 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ✓ | - |
5 | MV1033 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ||
6 | TK026 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ✗ | - |
6 | TK1026 | 209 | 280 | 255 | 195 | 173/182 | 237 | 281 | 418 | 201 | 6/7 | ||
7 | TV029 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ✓ | - |
7 | TV1029 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ||
8 | TV038 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ✓ | - |
8 | TV1038 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ||
9 | TV040 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ✓ | ✓ |
9 | TV1040 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ||
10 | TV048 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ✓ | ✓ |
10 | TV1048 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ||
11 | TV051 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 | ✓ | - |
11 | TV1051 | 209 | 280 | 255 | 195 | 173 | 237 | 281 | 418 | 201 | 6 |
Infections with day 0 versus recurrence differences are highlighted in bold.
Microsatellite-based multi-locus genotype (MLG).