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. 2023 Jul 7;19(7):e1010807. doi: 10.1371/journal.pgen.1010807

Table 1. Baymer modeled 1KG private continental context mutations with extreme polymorphism probability differences.

Population Comparison Context Mutation ln(Poly. Prob. Fraction) Poly. Prob. Fraction Overlap Shift Difference Shift Fraction Overlap Population Specificity
European vs. African TCC>Tabc 0.291 0 -0.174 1.4E-157 European
TCT>Tabc 0.136 1.6E-18 -0.116 8.5E-16 European
GCAATTA>G 0.569 4.7E-03 -0.668 2.4E-03 -
TATATATC>G -0.660 7.2E-03 0.730 5.6E-03 African
European vs. South Asian TCC>Tabc 0.112 1.2E-09 -0.059 2.7E-03 European
TCT>Tabc 0.063 5.0E-03 -0.066 2.9E-03 European
CTATA>T -0.587 2.9E-03 0.493 7.3E-03 South Asian
ATCTTC>G -0.606 7.6E-03 0.668 5.4E-03 -
European vs. East Asian CCC>Tabc 0.081 1.4E-03 0.075 6.6E-04 -
TCC>Tabc 0.312 0 -0.156 2.4E-97 European
GCT>T -0.064 5.7E-03 0.095 6.1E-05 -
TCT>Tabc 0.133 3.0E-19 -0.102 9.6E-06 European
GCAACCA>G 1.056 5.3E-03 -1.104 5.0E-03 -
ATACCTC>A -1.029 4.2E-03 0.830 5.0E-03 East Asian
African vs. South Asian TCC>Tabc -0.179 1.7E-118 0.115 3.4E-12 -
CTATA>T -0.507 6.1E-03 0.482 7.4E-03 South Asian
CCCCCAG>G -0.818 2.6E-03 0.767 2.7E-03 -
TATATATC>G 0.668 3.3E-03 -0.738 2.2E-03 African
African vs. East Asian GCT>T -0.063 9.1E-03 0.074 2.2E-03 -
CTCGCG>T 1.240 2.8E-03 -1.243 3.6E-03 -
TAAAATA>T -1.160 3.9E-03 1.135 4.8E-03 -
ATACCTC>A -1.061 4.6E-03 0.829 5.7E-03 East Asian
TATATATC>G 0.712 3.9E-04 -0.748 1.3E-04 African
East Asian vs. South Asian TCC>Tabc -0.200 2.4E-155 0.097 5.4E-05 -
CTATA>T -0.519 5.3E-03 0.479 7.8E-03 South Asian
CTCGCG>T -1.244 2.0E-03 1.247 2.7E-03 -
ATACCTC>A 0.906 8.5E-03 -0.819 9.1E-03 East Asia
CCCCCAG>G -0.819 3.8E-03 0.764 4.4E-03 -

a previously reported in Mathieson and Reich [20]

b previously reported in Harris and Pritchard [22]

c previously reported in Aikens et al [34]