Table 1.
List of candidate genes used in this study for quantitative real-time PCR, their primer details, and function in the virulence and pathogenicity of C. albicans.
| Gene | Function | Primer sequence (5ʹ–3ʹ) | References |
|---|---|---|---|
| als3 | Agglutinin-like protein that is vital for adhesion to oral mucosa and epithelial cells. Mediates yeast aggregation that acts as a primary step in biofilm formation |
F: CAACTTGGGTTATTGAAACAAAAACA R: AGAAACAGAAACCCAAGAACAACC |
Green et al., 200669 |
| hwp1 | Hyphal wall protein gene essential for hyphal elongation |
F: GCTCCTGCTCCTGAAATGAC R: CTGGAGCAATTGGTGAGGTT |
Carlisle and Kadosh, 201370 |
| ume6 | Transcriptional activator of filamentous growth. Regulates hyphal elongation and germ tube formation |
F: ACCACCACTACCACCACCAC R: TATCCCCATTTCCAAGTCCA |
|
| eap1 | Associated with cell adhesion and filamentation. Initiates adhesion to polystyrene and epithelial cells |
F: TGTGATGGCGGTTCTTGTTC R: GGTAGTGACGGTGATGATAGTGACA |
Fox et al., 201371 |
| efg1 | A transcription factor that regulates switch between white and opaque cells and cell wall dynamics. Essential for biofilm formation and filamentous growth |
F: GCCTCGAGCACTTCCACTGT R: TTTTTTCATCTTCCCACATGGTAGT |
Kumamoto and Vinces, 200572 |
| cph1 | Transcription factor involved in pseudohyphal and hyphal formation and phenotypic switching |
F: TATGACGCTTCTGGGTTTCC R: ATCCCATGGCAATTTGTTGT |
|
| ras1 | Mediates cell adhesion, induces filamentous growth, regulates phenotypic switching |
F: CCCAACTATTGAGGATTCTTATCGTAAA R: TCTCATGGCCAGATATTCTTCTTG |
Inglis and Sherlock, 201373 |
| hst7 |
Filamentation required for opaque mating or white biofilm formation |
F: TCATCAGCTTCTTCTATAC R: TATTGAGGAAATGACAGTT |
Köhler and Fink, 199674 |