TABLE 2.
Relatedness of chlamydial genomic DNA as assessed by AFLP analysis
| Isolate | Relatednessa
|
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|
|
C. pneumoniae
|
C. psittaci
|
C. trachomatis
|
||||||||
| Human CM-1 | Parakeet 6BC | Pigeon D661 | Feline Cat12137 | Murine MoPn | Swine R19 | Human
|
||||
| C | D | G | L2 | |||||||
| C. psittaci | ||||||||||
| Parakeet/6BC | 64.6 | |||||||||
| Pigeon/D661 | 64.8 | 81.7 | ||||||||
| Feline/Cat12137 | 57.8 | 58.0 | 56.9 | |||||||
| C. trachomatis | ||||||||||
| Murine/MoPn | 58.4 | 56.6 | 63.0 | 71.0 | ||||||
| Swine/R19 | 59.6 | 57.7 | 65.5 | 65.3 | 74.2 | |||||
| Human/C | 47.8 | 56.9 | 63.1 | 64.6 | 58.9 | 60.0 | ||||
| Human/D | 46.7 | 60.0 | 62.4 | 68.1 | 58.1 | 63.3 | 91.7 | |||
| Human/G | 52.7 | 57.4 | 58.2 | 63.2 | 57.4 | 62.6 | 90.7 | 92.6 | ||
| Human/L2 | 53.9 | 54.5 | 53.7 | 60.2 | 60.9 | 61.9 | 88.4 | 86.0 | 87.2 | |
| C. pecorum Bovine/E58 | 57.5 | 57.8 | 58.6 | 57.1 | 65.1 | 65.9 | 60.5 | 66.7 | 65.9 | 65.1 |
a
Values represent percent similarity between AFLP fingerprints, calculated using the band-based Dice similarity coefficient.