Table 2.
Inferred spatiotemporal data at major nodes
Node | Date (CE) [95% highest probability density] |
Location (posterior probability) |
---|---|---|
Xci origin |
−9501 [−13099 to −6446] [−12052 to −3851] |
South Asia 1 (0.85) Bangladesh, India, Pakistan |
Xci diversification |
1218 [962–1437] [−3648 to 285] |
South Asia 1 (0.81) Bangladesh, India, Pakistan |
Xci (AW, A) divergence | 1305 [1061–1511] | South Asia 1 (0.82) |
Xci A* diversification | 1523 [1377–1650] |
South Asia 1 (0.80) Iran, Oman, Saudi Arabia |
Xci AW diversification | 1461 [1227–1675] |
South Asia 1 (0.80) Bangladesh, India, Pakistan |
Xci A diversification | 1524 [1390–1637] |
South Asia 1 (0.99) Bangladesh, India, Pakistan |
Xci A - (A2, A1) divergence | 1570 [1408–1684] |
South Asia 1 (1.00) Bangladesh, India, Pakistan |
Xci A1 diversification | 1696 [1607–1768] |
South Asia 1 (1.00) Bangladesh, India, Pakistan |
Xci A expansion (polytomy) | 1829 [1799–1845] | South East Asia 2 (0.62) |
Xci A—New Zealand MRCAa | 1925 [1896–1949] | South East Asia 2 (0.79) |
Xci A—South America MRCAa | 1930 [1907–1951] | South East Asia 2 (0.96) |
Xci A—SWIO islands MRCAa | 1868 [1844–1899] | South East Asia 2 (0.83) |
Xci A—Caribbean MRCAa | 2000 [1991–2008] | SWIO islands (1.00) |
Estimations inferred by Patané et al. 34 (in italics) were indicated when possible.
CE Current Era, SWIO South West Indian Ocean, South Asia 1: Bangladesh, India and Nepal; South East Asia 2: Indonesia and Philippines; SWIO islands: Comoros, Mauritius, Rodrigues, Mayotte and La Réunion.
aFor nodes indicated with an asterisk, reconstructed locations are given for the parent node, i.e., the split between the MRCA of the strains from the indicated geographic areas and its closest relative.