Skip to main content
. 2023 Jul 12;12:e84881. doi: 10.7554/eLife.84881

Table 1. Simulation parameters for remodeling dynamics.

Gag copy number ~2500
Gag-Pol copy number ~125
Lipid copy number 4000
Radius of sphere 67 nm
Time-step 0.2 μs
ka2D (nm2/μs), ka3D (M–1s–1), kb Gag-Mem 1, 1.2×106, 0.61 s–1
ka2D (nm2/μs) Gag-Gag dimer 2.5×10–3 2.5×10–2 2.58×10–1
ka2D (nm2/μs) Gag-Gag hexamer 2.5×10–3 2.5×10–2 2.737×10–1
ka3D (M–1s–1) Gag-Gag hexamer 1.5×104 1.5×105 1.6×106
kb Gag-Gag dimer (s–1) (–11.62kBT) 1.35×10–1 s–1 1.35×100 1.4×101
kb Gag-Gag dimer (s–1) (–13.62kBT) 1.8×10–2 s–1 1.8×10–1 1.89×100
kb Gag-Gag hexamer (s–1) (–5.62kBT) 5.45×101 5.5×102 6.01×103
kb Gag-Gag hexamer (s–1) (–7.62kBT) 7.37×100 7.44×101 8.13×102
kb Gag-Gag hexamer (s–1) (–9.62kBT) 1.0×100 1.0×101 1.1×102
kb Gag-Gag hexamer (s–1) (–11.62kBT) 1.35×10–1 1.36×100 1.49×101
ΔGstrain 2.3kBT