Table 1. Simulation parameters for remodeling dynamics.
| Gag copy number | ~2500 | ||
| Gag-Pol copy number | ~125 | ||
| Lipid copy number | 4000 | ||
| Radius of sphere | 67 nm | ||
| Time-step | 0.2 μs | ||
| ka2D (nm2/μs), ka3D (M–1s–1), kb Gag-Mem | 1, 1.2×106, 0.61 s–1 | ||
| ka2D (nm2/μs) Gag-Gag dimer | 2.5×10–3 | 2.5×10–2 | 2.58×10–1 |
| ka2D (nm2/μs) Gag-Gag hexamer | 2.5×10–3 | 2.5×10–2 | 2.737×10–1 |
| ka3D (M–1s–1) Gag-Gag hexamer | 1.5×104 | 1.5×105 | 1.6×106 |
| kb Gag-Gag dimer (s–1) (–11.62kBT) | 1.35×10–1 s–1 | 1.35×100 | 1.4×101 |
| kb Gag-Gag dimer (s–1) (–13.62kBT) | 1.8×10–2 s–1 | 1.8×10–1 | 1.89×100 |
| kb Gag-Gag hexamer (s–1) (–5.62kBT) | 5.45×101 | 5.5×102 | 6.01×103 |
| kb Gag-Gag hexamer (s–1) (–7.62kBT) | 7.37×100 | 7.44×101 | 8.13×102 |
| kb Gag-Gag hexamer (s–1) (–9.62kBT) | 1.0×100 | 1.0×101 | 1.1×102 |
| kb Gag-Gag hexamer (s–1) (–11.62kBT) | 1.35×10–1 | 1.36×100 | 1.49×101 |
| ΔGstrain | 2.3kBT | ||