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. 2023 Jun 28;26(7):107193. doi: 10.1016/j.isci.2023.107193
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

H3S10p (IF, 1:5000) Santa Cruz Biotechnology Cat# sc-8656-R; RRID: AB_653256
SYCP3 (IF, 1:200) Abcam Cat# ab97672; RRID: AB_10678841
CAP-H (IF, 1:100) Proteintech Cat# 11515-1-AP; RRID: AB_2150003
KCTD19-M (IF, 1:100; WB, 1:2000) This study Customized production by ABclonal (China)
KCTD19-N (WB, 1:2000), not suitable for IF staining This study Customized production by ABclonal (China)
GFP (WB, 1:3000) Abmart Cat# M20004; RRID: AB_2619674
β-actin (WB, 1:6000) Abcam Cat# ab8227; RRID: AB_2305186
GAPDH (WB, 1:2000) Millipore Cat# MAB374; RRID: AB_2107445
Goat Anti-Mouse IgG1, Alexa Fluor 488 Conjugated (IF, 1:100) Thermo Fisher Scientific Cat# A-21121; RRID: AB_2535764
Donkey Anti-Rabbit IgG (H+L), Alexa Fluor 555 Conjugated (IF, 1:200) Thermo Fisher Scientific Cat# A-31572; RRID: AB_162543
HRP Donkey anti-rabbit IgG (WB, 1:10000) BioLegend Cat# 406401; RRID: AB_2099368
HRP Goat anti-mouse IgG (WB, 1:10000) BioLegend Cat# 405306; RRID: AB_315009

Bacterial and virus strains

Trans5α Chemically Competent Cell TransGen Biotech Cat# CD201

Biological samples

Paraffin-embedded human testicular tissue blocks This study N/A
Frozen human peripheral blood samples This study N/A

Chemicals, peptides, and recombinant proteins

RNAiso Plus TaKaRa Cat# 9109
Bouin’s solution Sigma Cat# HT10132
Triton X-100 Sigma Cat# T9284
Lectin PNA, Alexa Fluor 568 Conjugate Thermo Fisher Scientific Cat# L32458
Normal rabbit IgG Cell Signaling Technology Cat# 2729S
VECTASHIELD Antifade Mounting Medium Vector Laboratories Cat# H-1000
Hoechst 33342 Invitrogen Cat# H3570
Dulbecco’s Modified Eagle Medium with high glucose HyClone Cat# SH30022.01
Fetal Bovine Serum Gibco Cat# 16000044
Penicillin-Streptomycin Gibco Cat# 15140122
PMSF Protease Inhibitor Thermo Fisher Scientific Cat# 36978

Critical commercial assays

FlexiGene DNA Kit QIAGEN Cat# 51206
TIANScript II RT kit TIANGEN Cat# KR107
PrimeSTAR® HS DNA Polymerase TaKaRa Cat# R044A
FastStart Universal SYBR Green Master Mix Roche Cat# 04913850001
Lipofectamine® 3000 Thermo Fisher Scientific Cat# L3000008

Oligonucleotides

sgRNAs and primers used in this study are listed in Table S3 This study N/A

Experimental models: Cell lines

HEK293T ATCC Cat# CRL-3216;
RRID: CVCL_0063

Experimental models: Organisms/strains

Mouse: C57BL/6N Beijing Vital River Laboratory Animal Technology Co. Strain Code: 213
Mouse: ICR Beijing Vital River Laboratory Animal Technology Co. Strain Code: 201
Mouse: Kctd19m1/m1 This paper N/A
Mouse: Kctd19m2/m2 This paper N/A

Software and algorithms

Sorting Intolerant From Tolerant (SIFT) SIFT RRID:SCR_012813
https://sift.bii.a-star.edu.sg/
PolyPhen-2 PolyPhen-2 RRID:SCR_013189
http://genetics.bwh.harvard.edu/pph2/
MutationTaster MutationTaster RRID:SCR_010777
http://www.mutationtaster.org/
MutationAssessor MutationAssessor RRID:SCR_005762
https://mutationassessor.org/
FATHMM FATHMM http://fathmm.biocompute.org.uk/
GERP++ GERP++ RRID:SCR_000563
http://mendel.stanford.edu/SidowLab/downloads/gerp/
SiPhy SiPhy RRID:SCR_000564
https://portals.broadinstitute.org/genome_bio/siphy/
PedMiner PedMiner https://mcg.ustc.edu.cn/bsc/pedminer/
BCFtools/RoH BCFtools/RoH https://samtools.github.io/bcftools/howtos/roh-calling.html
NIS-elements Basic Research Nikon RRID: SCR_002776
CellSens Olympus RRID: SCR_014551
GraphPad Prism GraphPad RRID: SCR_002798