| Antibodies |
|
| anti-Kbhb |
PTM Biolabs |
Cat# PTM-1201RM |
| anti-H3K9bhb (mono) |
PTM Biolabs |
Cat# PTM-1250 |
| anti-H3K9bhb (poly) |
PTM Biolabs |
Cat# PTM-1250RM |
| anti-H4K8bhb |
PTM Biolabs |
Cat# PTM-1253RM |
| anti-Kac |
Cell Signaling Technology |
Cat# 9814S; RRID: AB_10544700
|
| Normal rabbit IgG |
Cell Signaling Technology |
Cat# 2749 |
| Goat anti-Rabbit IgG HRP |
Thermo Scientific |
Cat# 31460 |
| Rabbit TrueBlot®: Anti-Rabbit IgG HRP |
ROCKLAND |
Cat# 18-8816-31 |
|
| Chemicals, peptides, and recombinant proteins |
|
| DL-β-Hydroxybutyric acid sodium salt (BHB) |
Sigma-Aldrich |
H6501 |
| Sodium butyrate |
Sigma-Aldrich |
B5887 |
| Trichostatin A (TSA) |
Sigma-Aldrich |
T8552 |
| RIPA buffer |
Thermo Scientific |
89901 |
| Protease inhibitor cocktail |
Thermo Scientific |
A32965 |
| Dynabeads™ M-280 Sheep Anti-Rabbit IgG |
Invitrogen |
11203D |
| DMEM (Dulbecco’s Modified Eagle’s Medium) |
Gibco |
10569044 |
| DPBS (Dulbecco’s Phosphate Buffered Saline) |
Gibco |
14190250 |
| Antibiotic-Antimycotic (100X) |
Gibco |
15240062 |
| Sequencing Grade Modified Trypsin |
Promega |
V5110 |
|
| Critical commercial assays |
|
| DC Protein Assay |
BioRad |
5000116 |
|
| Experimental models: Cell lines |
|
| HEK293T |
N/A |
N/A |
| iMEFs |
ATCC |
CRL-1503 |
|
| Software and algorithms |
|
| Prism (v9.5.1.) |
Graphpad |
https://www.graphpad.com/ |
| ProteinProspector (v 6.4.0) |
Guan et al., 201134
|
https://sargent.ucsf.edu/prospector/mshome.htm |
| Raw data |
This paper |
https://doi.org/10.17632/ttbt8hfhw5.1 |