Table 1.
Genes present in the Neocinnamomum chloroplast genome.
| Category | Group of Genes | Genes Names |
|---|---|---|
| Photosynthesis gene | Photosystems I | psaA, psaB, psaC, psaJ, psaI |
| Photosystems II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | |
| Cytochrome b/f complex | petA, petB A, petD A, petG, petL, petN | |
| ATP synthase | atpA, atpB, atpE, atpF A, atpH, atpI | |
| NADH dehydrogenase | ndhA A, ndhB A,C, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK | |
| Rubisco Large subunit | rbcL | |
| Self-replication gene | RNA polymerase | rpoA, rpoB, rpoC1 A, rpoC2 |
| Ribosomal proteins (SSU) | rps2, rps3, rps4, rps7 C, rps8, rps11,rps12 B,C, rps14, rps15, rps16 A, rps18, rps19 | |
| Ribosomal proteins (LSU) | rpl2 A, rpl14, rpl16 A, rpl20, rpl22, rpl23, rpl32, rpl33, rpl36 | |
| Transfer RNAs | trnA-UGC A,C, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC, trnG-UCC A, trnH-GUG, trnI-CAU C , trnI-GAU A, trnK-UUU A, trnL-CAA C, trnL-UAA A, trnL-UAG, trnM-CAU, trnN-GUU C, trnP-UGG, trnQ-UUG, trnR-ACG C, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC C, trnV-UAC A, trnW-CCA, trnY-GUA | |
| Ribosomal RNAs | rrn4.5 C, rrn5 C, rrn16 C, rrn23 C | |
| Other genes | Maturase | matK |
| Envelop membrane protein | cemA | |
| Subunit of acetyl-CoA-carboxylase | accD | |
| Translational initiation factor | infA | |
| C-type cytochrome synthesis | ccsA | |
| Proteolysis | clpP B | |
| Functions unknown | Hypothetical chloroplast reading frames(ycf) | ycf1 C, ycf2 C, ycf3 B, ycf4 |
A and B indicate one intron and two introns, respectively. C indicates two copies of the gene.