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. Author manuscript; available in PMC: 2023 Jul 22.
Published in final edited form as: J Bioinform Comput Biol. 2023 Mar 11;21(1):2350002. doi: 10.1142/S0219720023500026

Fig. 4.

Fig. 4.

The workflow of exporting NuKit outputs and loading into QuPath Image Analysis Pipeline. (a) Select “Export QuPath Annotation Object” in the NuKit platform to output GeoJSON file. (b) In QuPath software, open the image and load the GeoJSON file as new project. (c) Segmented nuclei by NuKit platform were loaded and further quantitative image analysis could be performed using QuPath software.